| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4305 |
|---|
| Symbol | |
|---|
| ID | 4666345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4781477 |
|---|
| End bp | 4782271 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639825491 |
|---|
| Product | aldolase II superfamily protein |
|---|
| Protein accession | YP_972619 |
|---|
| Protein GI | 120612941 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA TCCCCGAGGC TTCCAGCGTG CGCAGCCAGG TCACGCCCGA GGAATGGCAG
ACCCGCGTCG AACTGGCCGC CGCCTACCGG CTGGTGGCCC ATTTCGGCTG GGACGATCTG
ATCTTCACGC ACATCTCCGC GCGCGTGCCG GGCCAGCCGG ACCAGTTCCT CATCAATCCC
TACGGCATGC TGTTCGACGA GATCACGGCC TCCAGCCTGG TCAAGGTGGA CCACCACGGC
GAGCCCGTCA TGGCGACGGA GTACGACGTG AACCCGGCGG GCTTCCTGAT CCACAGCGCG
ATCCACGAGG GCCGGCCCGA AGTGCAGTGC GTCCTGCACA CCCACACGCA GTACGGCGTG
GCGGTGTCGG CGCAGTACGG CGTGGCGGTG TCGGCGCAGG AGGGCGGGCT GCTGCCGATC
TCGCAGCAGT CCATCTTCCC GCTCGCGCGG CTGGCCTACC ACGGCTACGA GGGCGTGGCG
CTGCGCGACG ACGAGCGGCC GCGGCTGGTG GCCGACCTGG GGGACGCCAG CTTCCTGATC
CTTCGCAACC ACGGCCTGCT GACCTGCGGG CGCAGCGTGC CCGAGGCCCT GCTGTCGATG
TACACGCTCG AATCGGCCTG CCGCATCCAG ATCCTGGCGC AGTCGGGCGG CGGCGCGCTC
ACGCGCATTC CCGACGAGAT CGTCGCCACC TCGGTGGAGC AGTCGCGGCA GGTGACCAAG
GGCAAGGGCG CGGGCCTGGC CTGGCCCGGG CTGCTGCGCC GGCTGGACCG GATCGACCCC
AGCTACCGGA CCTGA
|
|---|
| Protein sequence | MNAIPEASSV RSQVTPEEWQ TRVELAAAYR LVAHFGWDDL IFTHISARVP GQPDQFLINP
YGMLFDEITA SSLVKVDHHG EPVMATEYDV NPAGFLIHSA IHEGRPEVQC VLHTHTQYGV
AVSAQYGVAV SAQEGGLLPI SQQSIFPLAR LAYHGYEGVA LRDDERPRLV ADLGDASFLI
LRNHGLLTCG RSVPEALLSM YTLESACRIQ ILAQSGGGAL TRIPDEIVAT SVEQSRQVTK
GKGAGLAWPG LLRRLDRIDP SYRT
|
|---|
| |