Gene Aave_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4298 
Symbol 
ID4666910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4773089 
End bp4773868 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID639825484 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_972612 
Protein GI120612934 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TGGCTACCCA CGCAGAATCC CCCGCTCCCA TCGCGTTCAA GGTGCTGACC 
GTGAACGTGC ACAAGGGCTT CACCTCCTTC AATCGCCGTT TCATGCTGCA CGAGCTGCGC
GAGGCTGTGC GCGGCGTATC GGCGGATATC GTCTTCCTGC AGGAGGTGCT CGGCACGCAC
CAGCGCCACG CCAACCGCGT GGCCAATTTC CCGCAGGAGC CGCACTACGA ATTCCTGGCC
GACACGATCT GGGGCCAGTA CGCCTACGGC CGCAATGCGG TGTACGACAA CGGGCACCAC
GGCAATGCGC TGCTGTCCAA GTTCCCCATC GTCCACTACG AGAACCATGA CATCTCCGTG
AGCGGCCCGG AGCGGCGCGG CATGCTGCAC TGCGTGCTGC AGCCGCCGGG GCACGACCGC
CAGGTGCATG CCATCTGCGT GCACCTGGGG CTGCAGGAGG CGCACCGCCA GCGCCAGTTG
CGGCGCGTGT GCGACCTGGT CAACACCTTC CCCGGCGACG ATCCCGTGAT CGTGGCGGGC
GACTTCAACG ACTGGCGCGG CCGCGCCCAC GAGGTGCTGC GCAAGGGCGC GGGGCTGCAC
GAGGTGTTCG TGCATGCGGG CGGTCGCGCG GTGCGCACGT TCCCGGCCTC GATGCCGCTG
CTGGCCCTCG ACCGCATCTA CGTGCGCAAC GCGTCGGTGC ATGCCCCCGT GGTGCTGCCG
CGCAAGCCCT GGCACAAGCT GTCGGACCAC GCGCCGCTGG CGGCGGAGAT CGCGCTATGA
 
Protein sequence
MASMATHAES PAPIAFKVLT VNVHKGFTSF NRRFMLHELR EAVRGVSADI VFLQEVLGTH 
QRHANRVANF PQEPHYEFLA DTIWGQYAYG RNAVYDNGHH GNALLSKFPI VHYENHDISV
SGPERRGMLH CVLQPPGHDR QVHAICVHLG LQEAHRQRQL RRVCDLVNTF PGDDPVIVAG
DFNDWRGRAH EVLRKGAGLH EVFVHAGGRA VRTFPASMPL LALDRIYVRN ASVHAPVVLP
RKPWHKLSDH APLAAEIAL