Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4221 |
Symbol | |
ID | 4666929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4678164 |
End bp | 4679630 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639825407 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_972535 |
Protein GI | 120612857 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.488782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGAAT CGTGGAAAGA GCACTTCATC CGGACGGGCT GCGGAGGTGC TGATCGTTAT CGTGCCGTGA TGGAGTCCTG CGTGGAGGAA CTGTCGAGTC TTTTCGAGAC TGCGGTGCGC CCCTATTCGG GCAGGGAGCC GTCCGATCTG CGCGAGCAGG TCTTCCTGCG TGACCTCGGA GTGCAAGCGG TAGCACCGCT GCAGCAGGTG ATCCGGGAAG TACGCCAGGA CATCGCTGCG CATGCAATCA TCGTCCAGCA CCCGCATTGC ATCGCCCACC TGCACACGCC ACCACTCCTG AGCGGCATCG CTGCGGAAAG CTTCATCGCG GCACAGAACC TTTCGATGGA TTCTTGGGAC CAATCGGGCT CCGCCACTTT TGTCGAGCAG CGGGTCGTGG ACCACCTCTG CACACTGTTC GGATATCTCC CCGAGGCGGA CGGTGTGTTT ACCAGCGGAG GCACCCAGGG CAACATCATG GCCCTGCTCA CGGCACGGGA CTGGTTCCTG TGGACGCACC ACGGGCACCG GGCCAGGCGT GACGGCATGC CCGATTTTTT CCCCAGGCTG AGGATCATCG CCTCGGCCAA GAGCCACTTC ACGGTGGACA AGGCAGCCTT CATCATGGGG CTGGGACAGC GCGGCGTGGT GAAGGTGCGG ACGGGAAACG ACGGTGCCAT GGACATGGAG GAGCTGGCAT CAACGGTCGA GTCTCTGCGG CAGGAGGGTC TGATCCCCTT CGCCGTGGTG GGAACGGCGG GCACCACGGA CCATGGCGCC ATCGACGATC TGCAGCGCAT CGGCGAAATC TCCCGGGCGC ACGGCTTATG GTTCCATGTG GATGGCGCCT ACGGCTCTGC CCTGGTGCTG GGCCGCCACA GGCACCGGCT CGCCGGTATC GAGCAGGCCG ATTCGATGGT GGCCGATTTC CACAAGCTGT GGTTTCAGCC CGTGAGTTGC GGGGCCCTGC TGTTCCGCGA AGGGGAACGC TTCAGGCACC TGCTCTACCA GGCTGAATAC CTGAACCGCG AGACCGATGA TCTTCCCAAC CTCGTGGACA AGACGATCTC CACGACGAGA CGCTTCGACG CCTTGAAGGT CTACATGATG CTACGGGCGG TCGGCACCGA AGTGCTGGGA GAGATGATCG ACCACCTGCT TGGACAGGCG CGCGAGGTTG CCGAGGCCAT CCGACGCCGC AGCATGTTCG AGCTTCTGGC CGAGCCGAGC CTGACAACCA TTCTTTTCAG GTACACCGGC CCCATGCCCG GTACTGATAT CGACGCTTTC AACCGCAGGC TTCGCGCCGG ACTTCTCAAG CACGGCATAG CCGTACTGGG GGAGACGACT GTCCAGCAGC GCGCTGCGCT GAAGCTGACT CTGCTGAACC CCTGCCTTGC CGCGGAGGAC TTCGACAGCC TCCTGGACAA CATTGCCGCC TTCGCAGCCC GCGTCTACAG CGAGTAG
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Protein sequence | MTESWKEHFI RTGCGGADRY RAVMESCVEE LSSLFETAVR PYSGREPSDL REQVFLRDLG VQAVAPLQQV IREVRQDIAA HAIIVQHPHC IAHLHTPPLL SGIAAESFIA AQNLSMDSWD QSGSATFVEQ RVVDHLCTLF GYLPEADGVF TSGGTQGNIM ALLTARDWFL WTHHGHRARR DGMPDFFPRL RIIASAKSHF TVDKAAFIMG LGQRGVVKVR TGNDGAMDME ELASTVESLR QEGLIPFAVV GTAGTTDHGA IDDLQRIGEI SRAHGLWFHV DGAYGSALVL GRHRHRLAGI EQADSMVADF HKLWFQPVSC GALLFREGER FRHLLYQAEY LNRETDDLPN LVDKTISTTR RFDALKVYMM LRAVGTEVLG EMIDHLLGQA REVAEAIRRR SMFELLAEPS LTTILFRYTG PMPGTDIDAF NRRLRAGLLK HGIAVLGETT VQQRAALKLT LLNPCLAAED FDSLLDNIAA FAARVYSE
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