Gene Aave_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4221 
Symbol 
ID4666929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4678164 
End bp4679630 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content63% 
IMG OID639825407 
Productpyridoxal-dependent decarboxylase 
Protein accessionYP_972535 
Protein GI120612857 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.488782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGAAT CGTGGAAAGA GCACTTCATC CGGACGGGCT GCGGAGGTGC TGATCGTTAT 
CGTGCCGTGA TGGAGTCCTG CGTGGAGGAA CTGTCGAGTC TTTTCGAGAC TGCGGTGCGC
CCCTATTCGG GCAGGGAGCC GTCCGATCTG CGCGAGCAGG TCTTCCTGCG TGACCTCGGA
GTGCAAGCGG TAGCACCGCT GCAGCAGGTG ATCCGGGAAG TACGCCAGGA CATCGCTGCG
CATGCAATCA TCGTCCAGCA CCCGCATTGC ATCGCCCACC TGCACACGCC ACCACTCCTG
AGCGGCATCG CTGCGGAAAG CTTCATCGCG GCACAGAACC TTTCGATGGA TTCTTGGGAC
CAATCGGGCT CCGCCACTTT TGTCGAGCAG CGGGTCGTGG ACCACCTCTG CACACTGTTC
GGATATCTCC CCGAGGCGGA CGGTGTGTTT ACCAGCGGAG GCACCCAGGG CAACATCATG
GCCCTGCTCA CGGCACGGGA CTGGTTCCTG TGGACGCACC ACGGGCACCG GGCCAGGCGT
GACGGCATGC CCGATTTTTT CCCCAGGCTG AGGATCATCG CCTCGGCCAA GAGCCACTTC
ACGGTGGACA AGGCAGCCTT CATCATGGGG CTGGGACAGC GCGGCGTGGT GAAGGTGCGG
ACGGGAAACG ACGGTGCCAT GGACATGGAG GAGCTGGCAT CAACGGTCGA GTCTCTGCGG
CAGGAGGGTC TGATCCCCTT CGCCGTGGTG GGAACGGCGG GCACCACGGA CCATGGCGCC
ATCGACGATC TGCAGCGCAT CGGCGAAATC TCCCGGGCGC ACGGCTTATG GTTCCATGTG
GATGGCGCCT ACGGCTCTGC CCTGGTGCTG GGCCGCCACA GGCACCGGCT CGCCGGTATC
GAGCAGGCCG ATTCGATGGT GGCCGATTTC CACAAGCTGT GGTTTCAGCC CGTGAGTTGC
GGGGCCCTGC TGTTCCGCGA AGGGGAACGC TTCAGGCACC TGCTCTACCA GGCTGAATAC
CTGAACCGCG AGACCGATGA TCTTCCCAAC CTCGTGGACA AGACGATCTC CACGACGAGA
CGCTTCGACG CCTTGAAGGT CTACATGATG CTACGGGCGG TCGGCACCGA AGTGCTGGGA
GAGATGATCG ACCACCTGCT TGGACAGGCG CGCGAGGTTG CCGAGGCCAT CCGACGCCGC
AGCATGTTCG AGCTTCTGGC CGAGCCGAGC CTGACAACCA TTCTTTTCAG GTACACCGGC
CCCATGCCCG GTACTGATAT CGACGCTTTC AACCGCAGGC TTCGCGCCGG ACTTCTCAAG
CACGGCATAG CCGTACTGGG GGAGACGACT GTCCAGCAGC GCGCTGCGCT GAAGCTGACT
CTGCTGAACC CCTGCCTTGC CGCGGAGGAC TTCGACAGCC TCCTGGACAA CATTGCCGCC
TTCGCAGCCC GCGTCTACAG CGAGTAG
 
Protein sequence
MTESWKEHFI RTGCGGADRY RAVMESCVEE LSSLFETAVR PYSGREPSDL REQVFLRDLG 
VQAVAPLQQV IREVRQDIAA HAIIVQHPHC IAHLHTPPLL SGIAAESFIA AQNLSMDSWD
QSGSATFVEQ RVVDHLCTLF GYLPEADGVF TSGGTQGNIM ALLTARDWFL WTHHGHRARR
DGMPDFFPRL RIIASAKSHF TVDKAAFIMG LGQRGVVKVR TGNDGAMDME ELASTVESLR
QEGLIPFAVV GTAGTTDHGA IDDLQRIGEI SRAHGLWFHV DGAYGSALVL GRHRHRLAGI
EQADSMVADF HKLWFQPVSC GALLFREGER FRHLLYQAEY LNRETDDLPN LVDKTISTTR
RFDALKVYMM LRAVGTEVLG EMIDHLLGQA REVAEAIRRR SMFELLAEPS LTTILFRYTG
PMPGTDIDAF NRRLRAGLLK HGIAVLGETT VQQRAALKLT LLNPCLAAED FDSLLDNIAA
FAARVYSE