| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4211 |
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| Symbol | |
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| ID | 4665976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4665699 |
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| End bp | 4667672 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639825397 |
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| Product | glycoside hydrolase 15-related protein |
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| Protein accession | YP_972525 |
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| Protein GI | 120612847 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.775495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.475845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTC CGGCCTCCAC GCCCCCTGCG TCGGCCCCGG CCCCGGCCCC GGCCCCGGCC
CCGGCCCCGG CCCCGGCATC CGCTGCCGCC AGCGCCGCCG CGGCCGCGGC GGCCAGCGCG
CCGACCTTCG CCGACGGCAA CCTCGGGCTG TCGCACGATC CGCTGCCGCG CCCGCCGGGC
TTCGCTGCGC CCGGGGAGGC CTCGCTGTCG CTCGGCATGG TGGGCAACTG CGCGGTCAGC
GCGCTGGTGG ACGCGAACGC CCACATCGTG TGGTGCTGCC TGCCACGCTT CGACGGCGAT
CCGGTGTTCA ACGCCCTCAT CCAGCCCGGC GAACAGGGCA GCCGATTCGC GATCGAACTG
GAAGACCAGG TCGAGAGCCG CCAGTGGTAC GAGCCCAATA CCGCGGTGCT GCGCACACGC
CTGACGGACC GCTCGGGCAA CAGCATCGAG GTGACCGATT TCGCGCCGCG GTTCCACGCA
CGCTCGCGCT TCTTCCGCCC CATGCTGCTG GTGCGCCGCG TGCGCCCCGT GCAGGGCTCG
CCGCGCATCC GCGTGACGGC GAACGTGCGC TTCGGCTGGG GCAGCGAGAA GCCCGGCGTC
ACGCGCGGCA GCAACCACGT GCGCTTCGTG GGCGCGGACC AGACGCTGCG GCTGAACACC
GATGCCCCGC TCTCGCACGT GCTCTCGGGC CAGCCGTTCG TCATCTCGCG CGAGTACAAC
TTCCTGCTGG GGGCGGATGA ATCGCTGCCC TTCGGCATCG CGGACACCGC CCGCTCCTAC
GAGCAGGAGA CCGTGGCCTA CTGGCGCCAG TGGACGCAGC GCCTGGCGGT GCCGCTGGAA
TGGCAGGACG CCGTGATCCG CGCGGCGATC ACGCTCAAGC TCTCGCTCTA CGAGGACACC
GGCGCGATCG TCGCGGCCAT GACCACGAGC ATCCCCGAAT CCGCCCACAG CGGCCGCAAC
TGGGACTACC GCTACTGCTG GCTGCGCGAC GCATTCTTCG TGGTGCGTGC GCTCAACAGC
CTGTCCGAGA CGGCCACGAT GGAGGACTAC CTGCGCTGGC TGAGCAACGT GGTGGTGGAG
GCCAGCAGCG GTCACATCCA GCCGCTCTAC GGCATCGGCC TGGAGCGGGA GCTGCCCGAA
TATTTCGTGC CGCAGCTGGC CGGCTACCGC GGCATGGGAC CGGTGCGCGT GGGCAACCAG
GCGGCGGAGC ACTTCCAGCA CGACGTGTAC GGCAACATCG TGCTCGGCGC GGCCCAGGCC
TTCCATGACC GGCGCCTGCT GCATCCGGCC GGGCCGGCGG AGTTCGCCCG CATGGAGCAG
ATCGGCGAGC TGGCGGTGAA GGTATATGGC ACGCCGGACG CAGGCATGTG GGAGCTGCGC
ACGCGCGCGA GGGTGCACAC CTCTTCCGCG CTCATGAGCT GGGCCGCCTG CGACCGGCTG
GCCAAGATCG CCGATTCGCT GCAACTCAGC GACCGCGCCG GCTACTGGCA CGGCCACGCG
CGGCGCATGA AGGACGAGAT CCTGGAGAAG TCCTGGAGCG ACAAGCGCCA GGCCTTCGCG
GAAAGCTTCG GCGGCAGCGA GCTGGACGCC AGCGTGCTGC TGATGGCCGA GGTGGGCCTG
ATCGACCCGC GCGACCCGCG CTTCGTGAGC ACCGTGGACG CCATGGAGCA GACGCTCTGC
GACGGCCCCT ACATGCGCCG CTACGAGGCC GCGGACGACT TCGGCAAGCC CGACACGGCC
TTCAACATCT GCACGTTCTG GCGCATCGAC GCCCTGGCGC GCATCGGCCG CCGCAGCCAG
GCCCGCGAGA TCTTCGAGGC CATGCTCGCC GCCCGCAACC CGCTGGGCCT GCTGTCGGAA
GACACGCACG CGCAGACGGG CGAGATGTGG GGCAACTTCC CGCAAACCTA TTCCATGGTG
GGCATCATCA ATGCCGCCAT GCGCCTCTCG GCGCCCTGGG ACAGCGTGAT CTGA
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| Protein sequence | MTSPASTPPA SAPAPAPAPA PAPAPASAAA SAAAAAAASA PTFADGNLGL SHDPLPRPPG
FAAPGEASLS LGMVGNCAVS ALVDANAHIV WCCLPRFDGD PVFNALIQPG EQGSRFAIEL
EDQVESRQWY EPNTAVLRTR LTDRSGNSIE VTDFAPRFHA RSRFFRPMLL VRRVRPVQGS
PRIRVTANVR FGWGSEKPGV TRGSNHVRFV GADQTLRLNT DAPLSHVLSG QPFVISREYN
FLLGADESLP FGIADTARSY EQETVAYWRQ WTQRLAVPLE WQDAVIRAAI TLKLSLYEDT
GAIVAAMTTS IPESAHSGRN WDYRYCWLRD AFFVVRALNS LSETATMEDY LRWLSNVVVE
ASSGHIQPLY GIGLERELPE YFVPQLAGYR GMGPVRVGNQ AAEHFQHDVY GNIVLGAAQA
FHDRRLLHPA GPAEFARMEQ IGELAVKVYG TPDAGMWELR TRARVHTSSA LMSWAACDRL
AKIADSLQLS DRAGYWHGHA RRMKDEILEK SWSDKRQAFA ESFGGSELDA SVLLMAEVGL
IDPRDPRFVS TVDAMEQTLC DGPYMRRYEA ADDFGKPDTA FNICTFWRID ALARIGRRSQ
AREIFEAMLA ARNPLGLLSE DTHAQTGEMW GNFPQTYSMV GIINAAMRLS APWDSVI
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