Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4210 |
Symbol | |
ID | 4666327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4664965 |
End bp | 4665702 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639825396 |
Product | HAD family hydrolase |
Protein accession | YP_972524 |
Protein GI | 120612846 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.418439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGC CACCGTTGCT GACCGCGCGC CACGCGCTGT TTCTCGACTT CGACGGCACG CTTGCCGACA TTGCACCGCA CCCCGATGCG GTGCAGGTGC ATCCGGGCGT GGTGCCGGCC CTGCGGGTCC TGCACGAACG CCTGGAGGGC GCCCTGGCCA TCGCCACGGG CCGCACGCAG GCCGATATCG ATCACTTCCT CAGCCCCCTG CAGCTGCCGC TGGCCTGCGA ACACGGCGCC CAGTACCGGA TGGTCAACGG CGTCATCGGC GGCGTGCCGG CCCCCGATCT CGCACCCGTG GTGCGTGCCG TGCAGCCGCT GCTGGACCGT TATCCAGCGC TGGTGCTCGA ACGCAAGAGC GCGGGCATGG CGCTGCACTA CCGCCAGGCG GTGGAGCTGG AGCCGCTGTG CCGCGCCGCG CTCGAGCATG CGCTGGCGCA GGCGCCCGGC CTGGAACTCA TGCAGGGCAA GTGCGTGCTG GAGATCAAGC CCTCCGGGCC GAACAAGGGC CGGGCGATCG CCGACTTCAT GCGCCAGACG CCGTTCGCGG GCCGCATCCC CGTGTTCGCG GGAGACGACG TGACCGATGA ATACGGCTTC GATGCGGCCC AGGCGCTCGG CGGCATCGGC ATCAAGATCG GAACCGGCGA CACCCGGGCG CTGGCACGCT GCGGCGACAC CACGGAGCTG CGCGAGTGGC TGTTCCAGAT GGCATCGCCG GAAGGGTTTC CCGCATGA
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Protein sequence | MQKPPLLTAR HALFLDFDGT LADIAPHPDA VQVHPGVVPA LRVLHERLEG ALAIATGRTQ ADIDHFLSPL QLPLACEHGA QYRMVNGVIG GVPAPDLAPV VRAVQPLLDR YPALVLERKS AGMALHYRQA VELEPLCRAA LEHALAQAPG LELMQGKCVL EIKPSGPNKG RAIADFMRQT PFAGRIPVFA GDDVTDEYGF DAAQALGGIG IKIGTGDTRA LARCGDTTEL REWLFQMASP EGFPA
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