| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4089 |
|---|
| Symbol | |
|---|
| ID | 4669419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4541673 |
|---|
| End bp | 4543478 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639825276 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_972404 |
|---|
| Protein GI | 120612726 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCT ACACGCCCTC CCTGCGCGAC ATGCAATTCG TCCTCCACGA GGTTTTCCGG
GTCACGGAGG AGTTCAAGGC GATCCCGCGC CATGCGGAGG TGGATGCCGA CACCGTGAAT
GCCGTGCTGG AAGAGGCCGG CAAGTTCGCC GCGGGCGTGG CGTTCCCGCT CAACATGAGC
GGCGACGAGG AGGGCTGCAC GCTGGACAAG GCCACGCACG AAGTGACCAC GCCCAAGGGC
TTCAAGGATG CCTACGCGCA GTATGTGGAA GGCGGCTGGG CGGCGCTGTC GTGCGATCCG
GAGTATGGCG GCCAGGGCCT GCCGTTCGTC GTGAACCAGT GCCTCTATGA AATGCTCAAC
AGCGCCAACC AGGCCTGGAC CATGTATCCG GGGCTGTCGC ACGGCGCCTA CGAGGCGTTG
CATGCGCACG GGACCGAAGA GCAGAAGAAG CTCTACCTGC CCAAGCTCAC CAGCGGCGAA
TGGACCGGCA CCATGTGCCT GACCGAGCCC CACTGCGGCA CCGACCTGGG CCTGCTGCGC
ACCAGGGCCG AGCCCGTGGC CGGCGCGCCC GAGGGTACGT ACAAGATCAC GGGCAACAAG
ATCTTCATCA GCGCGGGCGA ACATGATTTC ACCGAGAACA TCGTGCACCT GGTGCTCGCC
CGCCTGCCGG ATGCGCCGAA GGGCAGCAAG GGCATCAGCC TGTTCGTGGT GCCCAAGTAC
AAGGTGAACG CCGACGGCTC GATCGGCGAG CGCAACCCGA TCTATTGCAC GGGCCTGGAG
CACAAGATGG GCATCCATGG CAACGCCACC GCCCAGATCT CCATCGACGG CGCCATCGGC
ACGCTGGTGG GCCAGCCGCA CAAGGGCCTG CAGGCCATGT TCGTGATGAT GAACGCCGCC
CGCCTGGGCG TGGGCAACCA GTCGCTGGGC CTGACCGAAG TGGCTTTCCA GAACGCGCTG
GCCTATGCCA AGGACCGCAT CCAGATGCGC AGCCTGTCGG GCACGAAGGC CAAGGACAAG
GAGGCCGATC CGATCATCGT GCACCCCGAC GTGCGCAAGA TGCTGCTCAC GGCCAAGGCC
TACGCCGAAG GCGCCCGCGC GCTGCAGATC TACTGCACGC TGCTGCTGGA CAAGGCGCAC
AGCCATCCCG ACGAGAAGGT GCGCAAGGAC AGTGATGAAC TCGTGGCGCT GCTCACGCCC
ATCGTGAAGG CCTTCATCAC CGACAACGGG CATATTTCCA CCAATGCCTG CATGCAGGTC
TTCGGTGGCC ACGGCTTCAT CAAGGAATGG GGCATGGAGC AGTTCGTGCG GGACAACCGC
ATCAACATGA TCTACGAAGG CACGAACACC GTGCAGTCGC TGGACCTGCT GGGCCGCAAG
ATCCTCGGCA ACAACGGCGC CACGCTCAAG AAGTTCGGCA AGCTCGTGGG CAAGCTGGTC
GAGGAAGAGG GCGTGAACGA GAAGATGGCC GAGTTCATCA ACCCCATCGC CTACCTGGGC
GACCAGATGA CGAAGTTCAC CACCGAGATC GGCTTCAAGG GTTTCCAGAA CCCCGACGAG
GTGGGCGCCG CGGCCGTGGA CTACCTGCGT GTGGCGGGTC ACCTGGTGTT CGGCTACATG
TTCGCCCGCA TGGCCCAGGT GGCCCTGCGG GAGATCGCTG CCGGCAATAC CGACCCGTTC
TACCAGGCCA AGCTGCAGAC GGCGCGCTTC TACTTCGCCA AGCTGTTCCC CGAGACGGCG
ACCCTGATGC GCACCGCGCG CACCGGTGCC AAGCCGCTGA TGGACACGGA CGCCGCCCTG
GCCTGA
|
|---|
| Protein sequence | MPTYTPSLRD MQFVLHEVFR VTEEFKAIPR HAEVDADTVN AVLEEAGKFA AGVAFPLNMS
GDEEGCTLDK ATHEVTTPKG FKDAYAQYVE GGWAALSCDP EYGGQGLPFV VNQCLYEMLN
SANQAWTMYP GLSHGAYEAL HAHGTEEQKK LYLPKLTSGE WTGTMCLTEP HCGTDLGLLR
TRAEPVAGAP EGTYKITGNK IFISAGEHDF TENIVHLVLA RLPDAPKGSK GISLFVVPKY
KVNADGSIGE RNPIYCTGLE HKMGIHGNAT AQISIDGAIG TLVGQPHKGL QAMFVMMNAA
RLGVGNQSLG LTEVAFQNAL AYAKDRIQMR SLSGTKAKDK EADPIIVHPD VRKMLLTAKA
YAEGARALQI YCTLLLDKAH SHPDEKVRKD SDELVALLTP IVKAFITDNG HISTNACMQV
FGGHGFIKEW GMEQFVRDNR INMIYEGTNT VQSLDLLGRK ILGNNGATLK KFGKLVGKLV
EEEGVNEKMA EFINPIAYLG DQMTKFTTEI GFKGFQNPDE VGAAAVDYLR VAGHLVFGYM
FARMAQVALR EIAAGNTDPF YQAKLQTARF YFAKLFPETA TLMRTARTGA KPLMDTDAAL
A
|
|---|
| |