Gene Aave_4079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_4079 
Symbol 
ID4666653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4530850 
End bp4532622 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content68% 
IMG OID639825266 
ProductABC transporter-related protein 
Protein accessionYP_972394 
Protein GI120612716 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTG CCGCCCGCAG CGACCGCGCC ACGATCGCCC GCCTGATTCC CTATCTGCTG 
CACTACCGTT GGCGAGTCCT GGCGGCGCTC GTGTTCGTCA TTGGCGCCAA GCTCGCGAAC
GTCGGCGTGC CGCTGCTGCT CAAGCGCATC GTGGACGCCA TGGCCCCGGC GCCGGGTTCC
GCCGCCGCGC TCGTGGTGGT TCCCGCCGGG CTGCTGGCGG CCTACGGGCT GCTGCGGCTG
AGCACATCGG TCTTCACCGA GTTGCGCGAA CTCGTCTTTG CCAAGGCCAC GCAGGGTGCC
GCGCGCCGTA TCGCGCTGCA GACCTTCGAG CATCTGCATG CGCTCAGCCT GCGCTTCCAC
CTGGAGCGCC AGACCGGGGG GATGACGCGC GACATCGAGC GCGGGGTGCG CGGCATCGAA
TCGCTGATCT CCTTCACGCT CTTCAATATC GGGGCCACGC TCATCGAAGT GTTCCTGGTC
CTGGCGGTAC TCGGGGGGAA ATTCGATCCC GCCTTTGCCT GGATCACGCT GGCCGCGCTG
GCCTGCTACA TCCTGTTCAC CGTGATGCTC ACCGAGTGGC GCACGCGTTT TCGCCGCGAA
GCCAACGCCT TCGACTCCGC GGCCCACACC AAGGCCGTGG ATTCGCTGCT GAACTACGAA
ACCGTCAAGT ACTTCAACAA CGAGCCTTTC GAGGTGCGCC GGTACGACGA AAGCCTGGAG
CAGTTGCGGC GTGCGAGGCT CAAGAGCCAG ACGTCGCTGT CGCTGCTCAA CGCGGGCCAG
CAGCTCATCA TCGCCACGGC CCTGGTCGCC ATGCTGTGGC GCGCGGCGCA GGGCGTGGCC
GACGGCCGCA TGACGCTGGG GGACCTGGTG ATGGTGAACG CCTTCATGAT CCAGCTCTAC
ATTCCCCTCA ACTTCCTGGG CGTGATCTAC CGCGAGATCA AGCAGAGCCT GACCGATCTG
GACAAGATGT TCACGCTCAT GGACCGCGAT CAGGAAGTGC GGGACGCGCC GCAGGCACCG
CCGCTGTCGC TGGGCGCGTC CGCGCCGTCG GTGCGTTTCG AGGGCGTGCA TTTCGCCTAT
GAGCCGGCGC GCACCATCCT GCACGGCGTC GATTTCGAGA TTCCTCCCGG CCGCACGGTG
GCGGTGGTCG GACCCTCGGG CTCGGGCAAG TCCACGCTCG CGCGGCTGCT GTTCCGCTTC
TACGACGTGC AGGCCGGGAG CATCACCATC GACGGACAGG ACATCCGCCA GGTCACCCAG
GACAGCCTGC GCCGCGCCGT GGGGGCCGTG CCGCAGGACA CGGTGCTGTT CAACGAAACC
ATTGCCTACA ACATCGCCTA TGGCAGGCCG GGTGCCTCGC AGGCGGAGAT CGAGGCCGCG
GCGCGCGCCG CGCGCATCCA CGATTTCATC GCAGGGCTGC CGGCGGGATA TGCCACGCAG
GTGGGCGAGC GGGGCCTGAA GCTGTCGGGC GGGGAAAAGC AGCGCGTGGC CATCGCCCGC
ACGCTGCTCA AGAACCCGCC CATCCTCGTG TTCGACGAGG CCACCTCCGC GCTCGATACG
GCCAACGAGC GGGCGATACA GGCCGAACTG CGCAGCGCCG CCCAGGGCAA GACGGTTCTG
CTCGTCGCCC ACCGCCTCTC GACCGTGGTG GACGCGCACG AGATCCTGGT CATGGATGCG
GGCCGGCTCG TCGAGCGCGG CACGCACGCG CGGTTGCTGG CGCTCGGGGG GCGCTATGCG
GACATGTGGC GCCAGCAGTC GCGAGAAGAG TGA
 
Protein sequence
MPVAARSDRA TIARLIPYLL HYRWRVLAAL VFVIGAKLAN VGVPLLLKRI VDAMAPAPGS 
AAALVVVPAG LLAAYGLLRL STSVFTELRE LVFAKATQGA ARRIALQTFE HLHALSLRFH
LERQTGGMTR DIERGVRGIE SLISFTLFNI GATLIEVFLV LAVLGGKFDP AFAWITLAAL
ACYILFTVML TEWRTRFRRE ANAFDSAAHT KAVDSLLNYE TVKYFNNEPF EVRRYDESLE
QLRRARLKSQ TSLSLLNAGQ QLIIATALVA MLWRAAQGVA DGRMTLGDLV MVNAFMIQLY
IPLNFLGVIY REIKQSLTDL DKMFTLMDRD QEVRDAPQAP PLSLGASAPS VRFEGVHFAY
EPARTILHGV DFEIPPGRTV AVVGPSGSGK STLARLLFRF YDVQAGSITI DGQDIRQVTQ
DSLRRAVGAV PQDTVLFNET IAYNIAYGRP GASQAEIEAA ARAARIHDFI AGLPAGYATQ
VGERGLKLSG GEKQRVAIAR TLLKNPPILV FDEATSALDT ANERAIQAEL RSAAQGKTVL
LVAHRLSTVV DAHEILVMDA GRLVERGTHA RLLALGGRYA DMWRQQSREE