Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_4079 |
Symbol | |
ID | 4666653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4530850 |
End bp | 4532622 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639825266 |
Product | ABC transporter-related protein |
Protein accession | YP_972394 |
Protein GI | 120612716 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTG CCGCCCGCAG CGACCGCGCC ACGATCGCCC GCCTGATTCC CTATCTGCTG CACTACCGTT GGCGAGTCCT GGCGGCGCTC GTGTTCGTCA TTGGCGCCAA GCTCGCGAAC GTCGGCGTGC CGCTGCTGCT CAAGCGCATC GTGGACGCCA TGGCCCCGGC GCCGGGTTCC GCCGCCGCGC TCGTGGTGGT TCCCGCCGGG CTGCTGGCGG CCTACGGGCT GCTGCGGCTG AGCACATCGG TCTTCACCGA GTTGCGCGAA CTCGTCTTTG CCAAGGCCAC GCAGGGTGCC GCGCGCCGTA TCGCGCTGCA GACCTTCGAG CATCTGCATG CGCTCAGCCT GCGCTTCCAC CTGGAGCGCC AGACCGGGGG GATGACGCGC GACATCGAGC GCGGGGTGCG CGGCATCGAA TCGCTGATCT CCTTCACGCT CTTCAATATC GGGGCCACGC TCATCGAAGT GTTCCTGGTC CTGGCGGTAC TCGGGGGGAA ATTCGATCCC GCCTTTGCCT GGATCACGCT GGCCGCGCTG GCCTGCTACA TCCTGTTCAC CGTGATGCTC ACCGAGTGGC GCACGCGTTT TCGCCGCGAA GCCAACGCCT TCGACTCCGC GGCCCACACC AAGGCCGTGG ATTCGCTGCT GAACTACGAA ACCGTCAAGT ACTTCAACAA CGAGCCTTTC GAGGTGCGCC GGTACGACGA AAGCCTGGAG CAGTTGCGGC GTGCGAGGCT CAAGAGCCAG ACGTCGCTGT CGCTGCTCAA CGCGGGCCAG CAGCTCATCA TCGCCACGGC CCTGGTCGCC ATGCTGTGGC GCGCGGCGCA GGGCGTGGCC GACGGCCGCA TGACGCTGGG GGACCTGGTG ATGGTGAACG CCTTCATGAT CCAGCTCTAC ATTCCCCTCA ACTTCCTGGG CGTGATCTAC CGCGAGATCA AGCAGAGCCT GACCGATCTG GACAAGATGT TCACGCTCAT GGACCGCGAT CAGGAAGTGC GGGACGCGCC GCAGGCACCG CCGCTGTCGC TGGGCGCGTC CGCGCCGTCG GTGCGTTTCG AGGGCGTGCA TTTCGCCTAT GAGCCGGCGC GCACCATCCT GCACGGCGTC GATTTCGAGA TTCCTCCCGG CCGCACGGTG GCGGTGGTCG GACCCTCGGG CTCGGGCAAG TCCACGCTCG CGCGGCTGCT GTTCCGCTTC TACGACGTGC AGGCCGGGAG CATCACCATC GACGGACAGG ACATCCGCCA GGTCACCCAG GACAGCCTGC GCCGCGCCGT GGGGGCCGTG CCGCAGGACA CGGTGCTGTT CAACGAAACC ATTGCCTACA ACATCGCCTA TGGCAGGCCG GGTGCCTCGC AGGCGGAGAT CGAGGCCGCG GCGCGCGCCG CGCGCATCCA CGATTTCATC GCAGGGCTGC CGGCGGGATA TGCCACGCAG GTGGGCGAGC GGGGCCTGAA GCTGTCGGGC GGGGAAAAGC AGCGCGTGGC CATCGCCCGC ACGCTGCTCA AGAACCCGCC CATCCTCGTG TTCGACGAGG CCACCTCCGC GCTCGATACG GCCAACGAGC GGGCGATACA GGCCGAACTG CGCAGCGCCG CCCAGGGCAA GACGGTTCTG CTCGTCGCCC ACCGCCTCTC GACCGTGGTG GACGCGCACG AGATCCTGGT CATGGATGCG GGCCGGCTCG TCGAGCGCGG CACGCACGCG CGGTTGCTGG CGCTCGGGGG GCGCTATGCG GACATGTGGC GCCAGCAGTC GCGAGAAGAG TGA
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Protein sequence | MPVAARSDRA TIARLIPYLL HYRWRVLAAL VFVIGAKLAN VGVPLLLKRI VDAMAPAPGS AAALVVVPAG LLAAYGLLRL STSVFTELRE LVFAKATQGA ARRIALQTFE HLHALSLRFH LERQTGGMTR DIERGVRGIE SLISFTLFNI GATLIEVFLV LAVLGGKFDP AFAWITLAAL ACYILFTVML TEWRTRFRRE ANAFDSAAHT KAVDSLLNYE TVKYFNNEPF EVRRYDESLE QLRRARLKSQ TSLSLLNAGQ QLIIATALVA MLWRAAQGVA DGRMTLGDLV MVNAFMIQLY IPLNFLGVIY REIKQSLTDL DKMFTLMDRD QEVRDAPQAP PLSLGASAPS VRFEGVHFAY EPARTILHGV DFEIPPGRTV AVVGPSGSGK STLARLLFRF YDVQAGSITI DGQDIRQVTQ DSLRRAVGAV PQDTVLFNET IAYNIAYGRP GASQAEIEAA ARAARIHDFI AGLPAGYATQ VGERGLKLSG GEKQRVAIAR TLLKNPPILV FDEATSALDT ANERAIQAEL RSAAQGKTVL LVAHRLSTVV DAHEILVMDA GRLVERGTHA RLLALGGRYA DMWRQQSREE
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