| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4048 |
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| Symbol | |
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| ID | 4665512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4499501 |
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| End bp | 4500949 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639825235 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_972363 |
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| Protein GI | 120612685 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.674396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCA GCTCCGCAGC CGAGATATCC CCTCCGCCAG GTCCTGCCCC GGACCGCCGC
ATCCTGCTGT GGATCGTCGC GGTGGGCTTC TTCATGCAGA CGCTGGACGC GACGATCGTC
AACACGGCCC TGCCGGCGAT GGCTGCCAGC CTGGGCGAAA GCCCGCTGCG CATGCAGTCG
GTGATCGTCG CGTATTCGCT CACCATGGCC ATGCTGATCC CCGCCTCGGG CTGGCTGGCC
GACCGCTTCG GCACGCGCAC GGTGTTCCTG TTCGCCATCG CCGTTTTCTC GCTCGGCTCG
CTGGCCTGCG CGGCATCGCG GCACTTGGGG GAGCTGGTCG CGGCGCGCGT GCTGCAGGGA
CTGGGCGGCG CGCTGCTGCT GCCCGTGGGG CGCCTGGCGG TGCTGCGCAC GTTCCCCCGG
GGCGAATTCC TGGAGGCGAT GAGCTTCGTC GCCATTCCGG GGCTGATCGG TCCTTTGCTG
GGGCCCACCC TGGGGGGCTG GCTGGTGCAG AGCGCATCGT GGCACTGGGT GTTCCTCATC
AACCTGCCGG TGGGCCTGAT CGGCATGCTC GCGACGGCCC GCTTCATGCC CGTGCTGCGG
GCCGAGCGGC CCGATCCCTT CGATACCGCG GGCTACGTGC TGCTGGCTTT CGGCATGGTG
GCCATATCGC TGGCCATCGA GGCGGCGGGC GTGGCGGGCC GCGGCGGGGC GGCGGCCCTG
GGCGTCGGCG GGCTCGTGGC GCTGGTCGTG TACTGGCTGC ATGCGGCGCG CCACGAACGG
CCGCTGTACT CGCCGCACCT GTTCCGTGTG CGGACCCTGT CCGTCGGGCT GCTGGGCAAT
CTGTTCTGCC GCCTGGGCAG CGGGGCGATG CCGTTCCTGA TACCTGTGTC GCTGCAACTG
CTGCTGGGGT ACTCGCCGCT GCATGCCGGC ATGATGATGC TGCCCGCAGC CCTCGCGGGC
ATGGCCGTCA AGCGCGTGGC GACGCCGCTG ATCCGCCGCT GCGGCTACCG CAACGTCCTG
GTCGCCAACA CCGCCATGCT GGGGATGCTG ATGGCCAGCT TCGCGCTGCG CGAACCCGGC
TGGCCGCTGG CGTGGCAGGT GCTGCAGCTG GCGGCCTTCG GTGCCGTCAA TTCCCTGCAG
TTCTCGGCGA TGAACACCAT CACCCTCAAG GACCTGGACG GTGCCAGCGC CAGCAGCGGC
AACGGCCTGC TGTCGATGGT GCAGATGCTG GCCATGAGCC TGGGCGTGGC GGTGGCCGGC
GCGGTGCTTT CGGAATGGAG CCAGGCGTAC GGCGGTCCGG AGGTGCCCGG CGCGGTGCTG
CACGCCTTCC AGTCCACCTT CCTGACGGTG GGCTTCATCA CCATCGCCTC GGCTGCCGTG
TTCTGGCAAC TGCCCCTGGA GGCGCGGACG CCGCCCCGCG AAGGGCCCGA GGTCTCGGGC
CAGGGATGA
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| Protein sequence | MSSSSAAEIS PPPGPAPDRR ILLWIVAVGF FMQTLDATIV NTALPAMAAS LGESPLRMQS
VIVAYSLTMA MLIPASGWLA DRFGTRTVFL FAIAVFSLGS LACAASRHLG ELVAARVLQG
LGGALLLPVG RLAVLRTFPR GEFLEAMSFV AIPGLIGPLL GPTLGGWLVQ SASWHWVFLI
NLPVGLIGML ATARFMPVLR AERPDPFDTA GYVLLAFGMV AISLAIEAAG VAGRGGAAAL
GVGGLVALVV YWLHAARHER PLYSPHLFRV RTLSVGLLGN LFCRLGSGAM PFLIPVSLQL
LLGYSPLHAG MMMLPAALAG MAVKRVATPL IRRCGYRNVL VANTAMLGML MASFALREPG
WPLAWQVLQL AAFGAVNSLQ FSAMNTITLK DLDGASASSG NGLLSMVQML AMSLGVAVAG
AVLSEWSQAY GGPEVPGAVL HAFQSTFLTV GFITIASAAV FWQLPLEART PPREGPEVSG
QG
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