| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_4009 |
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| Symbol | |
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| ID | 4669467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4454162 |
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| End bp | 4456432 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639825196 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_972324 |
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| Protein GI | 120612646 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0849352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCAATT CCGGCAGTTG
CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC
CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA
GGCGGTGGCA AGCGTTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC
CATCGGCTGT ACTCCTACCA CCTGCGCCTG CAGCCCTGGC TGTGGGTGGC CACGCGGCGG
CAGGACTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTCCAGGA AGTGCTGGGT
CGCTACGGTT ACCCCATGCA GCTCAAGCTC ACGCGCGCCT ACCGTGCCTG GGATTACTGC
GTGCAGTACG GCGAGAGCGA CTTCGACTTC GTTTCCCGCC TGCTCGAGCA TGAAGGGGCG
TACTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCCGA CGACATCGTG
GCCGGCCACG AGCCTTTGCC GGGCGCGGCC GTGATCCCGT TCTACCCACC CGAGAAGTCG
GCCGTCGCGG ACCGCGAGAA CATCCACGCC TGGACCCTGG GCGAGGAGAT CAAGTCCGGC
CGCTACTACA ACGACGACTA CGACTTCCGC AAACCGAGGT CGGACCTCTC CAACATGCGC
CAGCAGCCCC CGGGGCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC
GTGCAGCATG GCGATGGTGA GCAGTACGCC CGGGTACGCC TGCAGGAAGG CCTGACGGGC
CACAGCGTCG TCAAAGGCGA ATCGCGCCAC CGCAGCCTCG CGACGGGCTA CACCTTCACG
CTGGAGAACT ACCCGCGGGG CGACCAGAAC CGGCAGTACC TCATCACCGG CGTCACCTAC
CACCTGCACG AGAACCCGAG AAGCTCATCC TTCAACAGCG CCAAGCCGGG TGAATCGCTC
AAGCACAACG AAGAGCAGGG GTTGTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC
CTGCCCTACA CCCCGGCCAG AAAGACCCCC AAACCCCGCA CGACCGGCCC GCAGACCGCC
GTCGTGGTCG GCCCGGCGGG CGAGGAAATC TGGACGGACG AGTACGGCCG CATCAAGGTG
CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGTTGCTG GATGCGGGTG
GCCACGAGCT GGGCGGGCTC GGGGTTCGGA GCGATCTCGA TCCCGCGCAT CGGGCACGAA
GTGGTGGTCG ACTTCCTCAA CGGCGATCCT GACTATCCGC TGGTCGTGGG CTGCGTGTAC
AACGCGGCGA ACATGCCGCC CTGGGCCTTG CCGGGCAATG CCACGCAGTC GGGCATCAAG
ACCAAGTCCA GCAAGGGCGG GGCCTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC
AACGCGATCC GCTTCGAGGA CAAGAAGGGC GCAGAGCAAT TATGGCTGCA TGCGCAGAAG
GACCAGCTCA TCGAGGTGGA AAACGACGAG GACCACTGGG TGGGCCAGGA CCGGCGCAAG
ACCATCGACC GGGACGAGAC GAACGTGATC CACCGGGACC GGACGGAAAC GGTGGACCGC
AACGAGAAAA TCACGGTGCA TGGCTGGCGC ACCGAGGAAG TGGATGGCGA CGAGACCATC
ACCATCCACT CCAACCGCAA GGAGCGTGTG GACCACGACG AGACGATCTC GATCGGCGAC
AACCGCGACG AGACCGTGGG CGCCAACGAA GACATCCGCA TCGGCAGCAA TCGCAGCAAG
ACCGTCGGGC AGAGCGAGAA GGACCGCATC GGCACCAGCT GGAACATCCG GGTGGGCACG
ATGAAGACCG AGACCATCGG GATGACGGCC ATGCAGAACG TGGGCCTGGC CAAGATGGTG
AACGTGGGGC TGGCCTACAG CGTCAACATC GGCGGCGTGC GCAGCGACAT CGTGGGCGCC
AACTGGACCC GCACGGTCAT CGGCAGCGAC TCGGTGAGCG TGGGCTCGGA CCGCAAGGCG
AGCGTGAGCG GCACGGACAG CCTGGAGGTG TCTGGCGCGC TCACGGTGAA GGCCAGGACC
ATCACGCTGG AGGCGGGCGA CGAGATCACG CTGCGCTGCG GATCGAGCAC GGTGCGGCTG
ACGCCCGCGC TCATCGAAGT GCTGTCCTCG CTGGACAAGC TCAACTGCTA G
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| Protein sequence | MTRRVTIRTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE
GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG
RYGYPMQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV
AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKSG RYYNDDYDFR KPRSDLSNMR
QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSVVKGESRH RSLATGYTFT
LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGESL KHNEEQGLFQ KFSLTAQPTS
LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV
ATSWAGSGFG AISIPRIGHE VVVDFLNGDP DYPLVVGCVY NAANMPPWAL PGNATQSGIK
TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLIEVENDE DHWVGQDRRK
TIDRDETNVI HRDRTETVDR NEKITVHGWR TEEVDGDETI TIHSNRKERV DHDETISIGD
NRDETVGANE DIRIGSNRSK TVGQSEKDRI GTSWNIRVGT MKTETIGMTA MQNVGLAKMV
NVGLAYSVNI GGVRSDIVGA NWTRTVIGSD SVSVGSDRKA SVSGTDSLEV SGALTVKART
ITLEAGDEIT LRCGSSTVRL TPALIEVLSS LDKLNC
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