Gene Aave_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3963 
Symbol 
ID4667755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4392466 
End bp4393893 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content75% 
IMG OID639825152 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_972280 
Protein GI120612602 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TGTCCGCGCG CGCGCCGCAT TCGCTGCGGG CGCGGCTGCT GTGCTTCCTG 
TTCGTGGCGA TCGTCTGCGC GGCGCTGCTG CAGTTCGCGC TCGCCTACCG CTCGGCGCTG
GCCGAGGCGG ACCAGATTTT CGACTACCAC ATGCAGCAGA CGGCGATGGC GCTGCGCCCC
GGCGTGCCGG CCATGGCGGA GGGCACGCCG GAGCCGCTGG AGCAGGAGGA GGAGGAGGAG
AGTACCGAGT TCGTGGTGCA GATCTGGTCG TCCGACGGGT TGCGGGTGTT CGAATCGTCC
GTGGGCGCGG CGCTGCCGCA GCGCGCGGTG CTGGGTTTCT CGAACGTGCG CGCGCACGGC
ACCACCTACC GCGTGTTCTC TGTGCAGACG CGCTCGCAGG TGATCCAGGT GGCGCAGGAC
ATGGCCGCGC GCCGCGAGAT GGCGCGCGAC CTGGCCTGGC GCACGGCGGG GCCGATCGCG
CTGCTGGCGC CCCTGCTGGC GCTGGCCGTG TGGTGGGCGG TGAGCGGCTC GCTCGCGCCG
GTGGAGCGGG TGCGGCGGCA ACTGGCGAAG CGGCAGGCGG ACGACCTGTC GCCCGTGCAT
GCGGGCGCGC TGCCGGACGA GGTGCGGCCG ATGGTGGACG AGCTGAACCT GCTGTTCGAG
CGCGTGCGCC GGGCCTTCGA GGCGCAGCAG CATTTCGTGG CGGATGCGGC GCACGAGCTG
CGCTCGCCGC TGGCGGCGCT CAAGCTGCAG CTGCAGGGCC TGCAGCGCGC GGGCAGCGAA
GAGGCGCGCG CGGTGGCGGC GGGGCGGCTC GCGGCCGGCA TCGACCGTGC CACGCGCCTC
GTGGAGCAGT TGCTGGCCCT GGCGCGGCAG GAGGCCAGCG CCGCCGCCGG CACGCCGCCC
GAGCCCGTGC CCCTGGCCGG CCTCGCCCGG CAGGCCGTGG CCGATGCCAC GCCGGCCGCG
CAGCACAAGA ACATCGACCT GGGCCTGGTG ACCGGCGACG CGGTGGCGGT GCTGGGGTAT
GCGGATGCGC TGCGCATCCT GCTGCGCAAC CTGGTGGACA ACGCCGTGAA GTACACGCCC
GACGGCGGCG TGGTGGACGT ACACGTGCGC GAAGTGACCG CAGGTCCGGG GCCTGCCGGC
GTGGAGCTGG TGGTGGAAGA CAGCGGCCCC GGGATCGCCG AGGACGACCG CGAGCGCGTG
CTGGGGCGCT TCTACCGCGC GCCCGCGGCG GCCGGCAGCG CGCCGGTGGG GGGCAGCGGG
CTGGGCCTGG CGATCGTGGA GTCGATCGCG CGGCTGCATG GCGCTGCGGT AGCGCTGGAC
GCCTCGCCGC GCCTGGGCGG GCTGCGCGTG GCGGTGCGCT TCGCGGTGGC GGCCGGCGTT
CCGGCGCTGC CGGGCGGGGG CACGGGGGGC CCGGGGGGCG GCGCTTGA
 
Protein sequence
MDALSARAPH SLRARLLCFL FVAIVCAALL QFALAYRSAL AEADQIFDYH MQQTAMALRP 
GVPAMAEGTP EPLEQEEEEE STEFVVQIWS SDGLRVFESS VGAALPQRAV LGFSNVRAHG
TTYRVFSVQT RSQVIQVAQD MAARREMARD LAWRTAGPIA LLAPLLALAV WWAVSGSLAP
VERVRRQLAK RQADDLSPVH AGALPDEVRP MVDELNLLFE RVRRAFEAQQ HFVADAAHEL
RSPLAALKLQ LQGLQRAGSE EARAVAAGRL AAGIDRATRL VEQLLALARQ EASAAAGTPP
EPVPLAGLAR QAVADATPAA QHKNIDLGLV TGDAVAVLGY ADALRILLRN LVDNAVKYTP
DGGVVDVHVR EVTAGPGPAG VELVVEDSGP GIAEDDRERV LGRFYRAPAA AGSAPVGGSG
LGLAIVESIA RLHGAAVALD ASPRLGGLRV AVRFAVAAGV PALPGGGTGG PGGGA