Gene Aave_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3934 
Symbol 
ID4666966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4360643 
End bp4361098 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID639825122 
ProductMarR family transcriptional regulator 
Protein accessionYP_972251 
Protein GI120612573 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.530394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00586866 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGCGCA TGTCCGATCC CCACATGGAT GTCCGTGAAC TGGCGCTGGC GATCTTCGCG 
GCGAACGGCC GCCTGCTGAA TGCGGGCAAC GAACTCGTGG CCCACCTGGG CCTGACCAGC
GCCTGGTGGC AGGTGCTTGC CGCCCTGCGG TATTCGGCGG GTCCGCTGGC CGTCGCATCC
ATCGCGCGCA ACATGGGGCT GACCCGCCAG GCGGTGCAAC GCATCGTCGA TCTGCTGGCT
GGGCAGGGGC TGGTCGAGTT CCAGCCCAAT CCCCATCACC GCCGCGCAAA GCTCGTCGTG
CTGACGCGCG CCGGCCTGGA TGCCGTGACC CGCGCCGAGC GCGCCGTGGC GCCGATCGAT
CAGGCCATCG CCGAGCGGAT CGGCACGGCC CGCATCCGTG GCGCCATCGC CACCCTCCAC
GCGATGGTGG AGGTGATCTC GGAGCAGCTC GGCTAG
 
Protein sequence
MLRMSDPHMD VRELALAIFA ANGRLLNAGN ELVAHLGLTS AWWQVLAALR YSAGPLAVAS 
IARNMGLTRQ AVQRIVDLLA GQGLVEFQPN PHHRRAKLVV LTRAGLDAVT RAERAVAPID
QAIAERIGTA RIRGAIATLH AMVEVISEQL G