Gene Aave_3918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3918 
Symbol 
ID4665994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4342320 
End bp4343444 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content71% 
IMG OID639825106 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_972235 
Protein GI120612557 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.666771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0844019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC AGCGCACGAT GCACCGCCTG CTCACGCTCC ACGCGTGGGC GGGCATCGTC 
ACGGGCCTGC TGCTGTTCGT CGTGTGCTTC TCGGGCGCGG TGGTGGTGTT CAAGAACGAG
ATCGACCTCT GGGCCAATCC GTCGCTCGCC CAATTGCCGC GCGCGGCGCA GCCCGCGCCG
CTCGACACGG TGCTCTCGCA CCTGCGGGCC CGCTACCCGG AGGCCACGGC CGAGACGATC
CAATTGCCGG ACGCGGACCG CCCGGCGTAC TTCGCGTTTC TGCGCACGCC CGGCGCGCCG
GGGGCCCAGC GCACCAAGGT GGCCCTGCGC GCCGACACCG GCGCGGTGGT GGGCCCGGTG
AACAGCCAGC TAGGCCAGAC CCTGCGCATG CTGCACGTGT TCCTGTTCTT CGGGCCGCGC
TGGATCGTCG GCTTCCTCGG CGTGGCGATG CTGGTGCTGA TCGCGACCGG CATCGTCATC
CACCGCAAGA TCCTCGCGGA GCTGTTCACC CAGCGCTGGG GCCGCAGCCT GCGCGTGGTG
ACGTCGGACC TGCACAAGTC CGCGGGCATC TGGGGCCTGG GCTTCCATAT CCTGATCGCT
GGTACGGGCG CGTGGCTGGG ACTGGCGCCG CTGTTCGAGC AGGGCTGGCG CTACATCGCC
ACCGGCCCTG CCCCGGCACG CGTGGCCATG GCGCCGGCAC CGGCACCCGC CCGCGCGGCC
CTGGTTCCAG CAGTTCCCAT GCCGTCGCTG GACGCACTGC ATGCCGCCGC CCGGCAGGCG
CTGCCGGGCT TCGAGGCCAC CACGCTGTCG CTGCGGCAAT GGGGCACACC GGAGGGGCAG
GTCCGCTTCA CCGGCAACCT GCAGGGGCAT CTGGCCAGCA CCGCGCACGT GGATTTCGAG
GGGGCCGGCG GCCGCATCCG GCAGGTGCAC GATCCGCGCA CCGCGGGGTT CTGGTCGATG
GTGAACGCGC TCATGGAGCC GCTGCACTTC GACGATTTCG GCGGGCTGCC GCTGAAATGC
CTCTATTTCC TGCTGGGCCT CACGCCCGCG TTCCTGTCGA TCACGGGCAC GCTGATCTGG
CTGGACGGCC GGCGCCAGCG CATGCCCGCC CCACCCCACG CGTGA
 
Protein sequence
MTSQRTMHRL LTLHAWAGIV TGLLLFVVCF SGAVVVFKNE IDLWANPSLA QLPRAAQPAP 
LDTVLSHLRA RYPEATAETI QLPDADRPAY FAFLRTPGAP GAQRTKVALR ADTGAVVGPV
NSQLGQTLRM LHVFLFFGPR WIVGFLGVAM LVLIATGIVI HRKILAELFT QRWGRSLRVV
TSDLHKSAGI WGLGFHILIA GTGAWLGLAP LFEQGWRYIA TGPAPARVAM APAPAPARAA
LVPAVPMPSL DALHAAARQA LPGFEATTLS LRQWGTPEGQ VRFTGNLQGH LASTAHVDFE
GAGGRIRQVH DPRTAGFWSM VNALMEPLHF DDFGGLPLKC LYFLLGLTPA FLSITGTLIW
LDGRRQRMPA PPHA