Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3918 |
Symbol | |
ID | 4665994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4342320 |
End bp | 4343444 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639825106 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_972235 |
Protein GI | 120612557 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.666771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0844019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCC AGCGCACGAT GCACCGCCTG CTCACGCTCC ACGCGTGGGC GGGCATCGTC ACGGGCCTGC TGCTGTTCGT CGTGTGCTTC TCGGGCGCGG TGGTGGTGTT CAAGAACGAG ATCGACCTCT GGGCCAATCC GTCGCTCGCC CAATTGCCGC GCGCGGCGCA GCCCGCGCCG CTCGACACGG TGCTCTCGCA CCTGCGGGCC CGCTACCCGG AGGCCACGGC CGAGACGATC CAATTGCCGG ACGCGGACCG CCCGGCGTAC TTCGCGTTTC TGCGCACGCC CGGCGCGCCG GGGGCCCAGC GCACCAAGGT GGCCCTGCGC GCCGACACCG GCGCGGTGGT GGGCCCGGTG AACAGCCAGC TAGGCCAGAC CCTGCGCATG CTGCACGTGT TCCTGTTCTT CGGGCCGCGC TGGATCGTCG GCTTCCTCGG CGTGGCGATG CTGGTGCTGA TCGCGACCGG CATCGTCATC CACCGCAAGA TCCTCGCGGA GCTGTTCACC CAGCGCTGGG GCCGCAGCCT GCGCGTGGTG ACGTCGGACC TGCACAAGTC CGCGGGCATC TGGGGCCTGG GCTTCCATAT CCTGATCGCT GGTACGGGCG CGTGGCTGGG ACTGGCGCCG CTGTTCGAGC AGGGCTGGCG CTACATCGCC ACCGGCCCTG CCCCGGCACG CGTGGCCATG GCGCCGGCAC CGGCACCCGC CCGCGCGGCC CTGGTTCCAG CAGTTCCCAT GCCGTCGCTG GACGCACTGC ATGCCGCCGC CCGGCAGGCG CTGCCGGGCT TCGAGGCCAC CACGCTGTCG CTGCGGCAAT GGGGCACACC GGAGGGGCAG GTCCGCTTCA CCGGCAACCT GCAGGGGCAT CTGGCCAGCA CCGCGCACGT GGATTTCGAG GGGGCCGGCG GCCGCATCCG GCAGGTGCAC GATCCGCGCA CCGCGGGGTT CTGGTCGATG GTGAACGCGC TCATGGAGCC GCTGCACTTC GACGATTTCG GCGGGCTGCC GCTGAAATGC CTCTATTTCC TGCTGGGCCT CACGCCCGCG TTCCTGTCGA TCACGGGCAC GCTGATCTGG CTGGACGGCC GGCGCCAGCG CATGCCCGCC CCACCCCACG CGTGA
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Protein sequence | MTSQRTMHRL LTLHAWAGIV TGLLLFVVCF SGAVVVFKNE IDLWANPSLA QLPRAAQPAP LDTVLSHLRA RYPEATAETI QLPDADRPAY FAFLRTPGAP GAQRTKVALR ADTGAVVGPV NSQLGQTLRM LHVFLFFGPR WIVGFLGVAM LVLIATGIVI HRKILAELFT QRWGRSLRVV TSDLHKSAGI WGLGFHILIA GTGAWLGLAP LFEQGWRYIA TGPAPARVAM APAPAPARAA LVPAVPMPSL DALHAAARQA LPGFEATTLS LRQWGTPEGQ VRFTGNLQGH LASTAHVDFE GAGGRIRQVH DPRTAGFWSM VNALMEPLHF DDFGGLPLKC LYFLLGLTPA FLSITGTLIW LDGRRQRMPA PPHA
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