Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3898 |
Symbol | |
ID | 4665468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4321897 |
End bp | 4322520 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639825086 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_972215 |
Protein GI | 120612537 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.88916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGC ACAAACGCAC TCTCCTTCGC AGCGCAGCGG CCTGCGCCCT GTTCGCCGGC GCGGCGGGCC TGCTCGGGGG CTGCTCCCAG GAAAAGGCCC CGTCCTTCCA GGGCGTGGAC ATCACCGGCG CGGAGTACGC GCGCGACCTG CCGCTGCCCG ACCACAACGG CCAGCCGCGC CATTTGAAGG ACTTCGCCGG CAAGGTGGTG GTCGTCTTCT TCGGCTATAC CCAGTGCCCG GACGTCTGCC CGACCTCCAT GGCCGAGCTG GCCGAGGTCA AGCGCTCGCT GGGCGCGGAC GGCGACCGGC TGCAGGGCCT GTTCGTCACG GTGGACCCGG AGCGCGACAC GCCCGAGGTG CTCAAGGCCT ACATGACCAA TTTCGATCCG GGCTTCCTCG CGCTGCGCGG CACGCCCGAG CAGCTCGCGG CCGTCGCCAA GGACTTCAAG ATCTACTACA AGAAGGTGCC CGGAAAGACG CCGACCAGCT ACACCATGGA CCACTCTGCA GGCAGCTACA TCTACGATCC GGCCGGCCGG CTGCGCGTCT ATCACCGCTA CGGCAGCGGT GCTCAGGCCC TGGCGTCCGA CGTCAAGGCC TTGCTGCAGG CGCCTGGCGC CTGA
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Protein sequence | MPMHKRTLLR SAAACALFAG AAGLLGGCSQ EKAPSFQGVD ITGAEYARDL PLPDHNGQPR HLKDFAGKVV VVFFGYTQCP DVCPTSMAEL AEVKRSLGAD GDRLQGLFVT VDPERDTPEV LKAYMTNFDP GFLALRGTPE QLAAVAKDFK IYYKKVPGKT PTSYTMDHSA GSYIYDPAGR LRVYHRYGSG AQALASDVKA LLQAPGA
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