| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3783 |
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| Symbol | |
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| ID | 4667719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4202738 |
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| End bp | 4205095 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824974 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_972103 |
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| Protein GI | 120612425 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.757692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC GCCGCGTAAC CATTCAGACA CCTTTGGGAG AGGCCCTGCA GTTCCGCCAG
TTGCAGGGCG AGGAAGCGCT GTCGGCGCTG TCTGCCTTCG AGATCGACCT GCTATCGAAG
GACAAGGGCA TCGACCCGAA GGCCCTGCTC GGCCTGGGCG CCACCGTCTC CATCGAAACC
GAGGGCCTGG GCCGCCGCTA CCTGGACGGC ATCGTGACCC GCTTCGGCAT GCGCGGGCAG
GACACCTCCG CGCAGATCGC CTACCGGCTC ACCCTGCAGC CCTGGCTGTG GCTCGCCACG
CGTCGCACCG ATTTCCGCAT CTTCCAGGAA ATGGACGTGC CGGCCATCGT CTCGCAGGTG
CTCTCGCGCT ACGGCCGGCC CTTCGTGCTG CGCCTCACGC GCGGCTACCG CAGCCGGCCC
TACACGGTGC AGTACCACGA GAGCGACTAC CAGTTCGTCT CGCGCCTGTG CGAATCCGAG
GGCATCTACT GGTTCGTGGA GCATGCCAGC GGCAGCCACA CGGTGGTTTT CGCCGACGAC
GTGGTGGCCT CGCACGCGCC GTTGCCGGGC GGCCACGTGA TCCCCTTCCA TCCCCCCGGC
AAGACGGCGA TCGCCGACCG CGAACACATC TTCGCCTGGC GCATGGGCCA GGGCGTCGCG
CCCGGCCGCG CCTACCTGGA CGACTACGAC TTCACCAAGC CGCGCGCCGA CCTCTCCGAG
ATGCGCCAGT CGCCCCCGGG CCATGCGCAC GACGCCTACG AGCGCTACGA ATGGCCGGGC
GGCTACACCG AGTACGCCGA CGGCGAGACC TACACGCGGC TGCACATGGA AGAAGGCATG
GCGGCCCGCG AGCGCGCCCA TGCCGAATTG AACAAGCGCA GCATCGCACC GGGCTACACC
ATCGTGCTGG AGAACTACCC GCGCGACGAC CAGAACCGGC AGTACCTCGT CACCCGCGTG
CACTACCACC TGGAAGAGAA CGTGCAGGCC ACCCAGGGCA CGGGCGGCGC CGGGCAGACG
CAGGCCGGCT CCGTGCAGAA ATTCAGCATG GAGGTGCACC CCACCTCCGT GCCCTACCGC
CCCGAAGTGA CCACCCCGCG CCCGCGCACC ACCGGCCCGC AGACGGCCGT GGTGGTCGGC
CCGCCCGGCG AGGAAATCTG GACCGACCAG TACGGCCGCG TGAAAGTGCA GTTCCACTGG
GACCGCATCG GTGCGATGAA CGAAAACTCC AGCTGCTGGG TGCGCGTCTC CACCAGCTGG
GCCGGCCCCG GCTTCGGCGC CGTGTTCACG CCGCGCATCG GGATGGAAGT CATCGTCGAT
TTCCTGAACG GCGACCCGGA CTATCCGATC ATCCTGGGCT GCGTCTATAA CGCCGCCAAC
ATGCCGCCCT GGGGCCTGCC GGGCAATGCC ACGCAGTCGG GCATCAAGAC GAAGTCCAGC
AAGGGCGGAG CCTTCGGCGA CGGCATGAAG AACGGCGCGG GCGATGCCAA CGCGATCCGC
TTCGAGGACA GGAAGGGCGC GGAGCAGCTG TGGCTGCATG CGCAGAAGGA CCAGCTCACC
GAAGTCGAGA ACGATGAGGA TAAGTGGGTG GGAAATGACC GGCGCAAGAC GATCGACCGG
GACGAGACCA ATGTGATCCA CCGGGACCGG ACGGAAACCG TCGACCGGAA CGAGAAGATC
ACGGTGCACG GCTGGCGCAC CGAGGAAGTC GATGGCGACG AGACCATCAC GATCCACTCC
AACCGCAAGG AGCGTGTGGA CCACGACGAG ACGATATCCA TCGGAGACAA CCGCAGGGAA
GACGTCGGCA TCGACGAGAC CATCTCCATC GGCAAGAACC GCAGCAAGAC CATCGGCCGC
AACGAGAAAG ACAAGATCGG CAACAACTGG TCGATCAAGG TCGGCAAGAT GAAGACCGAG
ACCATCGGCA TCGCCTGCAT GCAGAACGTG GGCGTGGGGC GGATGGAGAA CGTGGGCGTG
GCTTACAACC TCAACGTGGG GGCCATGATG GCCACCGTCG TCGGGAGCAC GCAGACCACG
ATGGTCGGCA GCGACCAGTC CACCACGGTC GGAACGAAAT ACACGCTCAC CGTGGGAGGT
GGCGGTGGCG GAGGAGGTGG TGGCGCGGCG GCGGCAGGAG GTCCCAAGAA CATCGTGGCA
TCTTCCAAAG GCCCGTCGGG CTCGGGGGGC GGCGGCTCCA ACATCACCAT GGATGCACAG
AGCGTGTCGA TCACCGTCGG CAGCAGCAGC CTCGTGCTCA AAGCGGACGG AACCATCACG
CTCAACGGCA AAGACATCAC CTTCGTCGGC GAGAACAAGA TCCTCTCCGT CAGCCCGCAG
GTCCGGGACA ACGACTGA
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| Protein sequence | MTQRRVTIQT PLGEALQFRQ LQGEEALSAL SAFEIDLLSK DKGIDPKALL GLGATVSIET
EGLGRRYLDG IVTRFGMRGQ DTSAQIAYRL TLQPWLWLAT RRTDFRIFQE MDVPAIVSQV
LSRYGRPFVL RLTRGYRSRP YTVQYHESDY QFVSRLCESE GIYWFVEHAS GSHTVVFADD
VVASHAPLPG GHVIPFHPPG KTAIADREHI FAWRMGQGVA PGRAYLDDYD FTKPRADLSE
MRQSPPGHAH DAYERYEWPG GYTEYADGET YTRLHMEEGM AARERAHAEL NKRSIAPGYT
IVLENYPRDD QNRQYLVTRV HYHLEENVQA TQGTGGAGQT QAGSVQKFSM EVHPTSVPYR
PEVTTPRPRT TGPQTAVVVG PPGEEIWTDQ YGRVKVQFHW DRIGAMNENS SCWVRVSTSW
AGPGFGAVFT PRIGMEVIVD FLNGDPDYPI ILGCVYNAAN MPPWGLPGNA TQSGIKTKSS
KGGAFGDGMK NGAGDANAIR FEDRKGAEQL WLHAQKDQLT EVENDEDKWV GNDRRKTIDR
DETNVIHRDR TETVDRNEKI TVHGWRTEEV DGDETITIHS NRKERVDHDE TISIGDNRRE
DVGIDETISI GKNRSKTIGR NEKDKIGNNW SIKVGKMKTE TIGIACMQNV GVGRMENVGV
AYNLNVGAMM ATVVGSTQTT MVGSDQSTTV GTKYTLTVGG GGGGGGGGAA AAGGPKNIVA
SSKGPSGSGG GGSNITMDAQ SVSITVGSSS LVLKADGTIT LNGKDITFVG ENKILSVSPQ
VRDND
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