| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3752 |
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| Symbol | |
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| ID | 4669222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4167370 |
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| End bp | 4169637 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824943 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_972073 |
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| Protein GI | 120612395 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.617325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCAATT CCGGCAGCTG
CGGGGTAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC
CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACGGCGA CGGTGGAGAT CGAGACCGAA
GGCGGCAAGC GCTACCTGGA CGGCCTGGTC ACGCGCTTCG GCATGCAGGG GCAGGACCAT
CGGCTGTACT CCTACCACCT GCGCCTGCAG CCCTGGCTCT GGGTGGCTAC GCGGCGGCAG
GACTTCCGCA TCTTCCAGTT CAAGACTGTC CCGCAGATCG TGCAGGAGGT GCTGGGCCGC
TACGGTTATC CGCTGCAATT GAAGCTCACG CGCGCCTACC GCGCCTGGGA CTACTGCGTG
CAGTACGGCG AGAGCGACTT CGACTTCGTC TCCCGCCTCT TGGAGCATGA GGGCGCGTAC
TACTACTTCC AGCACGCGAG CGGCCAGCAC ACCCTGGTGA TCGCCGACGA CATCGTGGCA
GGCCACGAGC CCCTGCCGGG CGCGGCCGTG ATCCCGTTCT ACCCGCCCGA GAAGTCGGCC
GTGGCCGACC GCGAGAACAT CCATGCCTGG ACGCTGGGCG AGGAGATCAA GCCCGGCCGG
TACTACAACG ACGACTACGA CTTCAAGAAG CCGAGGTCGG ACCTGTCCAA CATGCGCCAG
CAGCCCCCGG GCCATGCGCA CGATGCCTAC GAGATCTACG AATGGCCGGG CGGCTACGTG
CAGCACGGCG ACGGCGAGCA GTACGCCCGC GTGCGCCTGC AGGAAGGCCT GACCGGGCAC
AGCACCGTCA GGGGCGAATC GCGCCACAGG AGCCTGGCGC CGGGCTACAC CTTCACGCTG
GAGAACTACC CGCGCGGCGA CCAGAACCGG CAGTACCTCA TCACCGGCGT CACCTACCAC
CTGCACGAGA ACCCGCGCAG TTCCTCGTTC AACAGCGCCA AGCCCGGCGA GACGCTCAAG
CACAACGAAG AGCACGGCTC CTTCCAGAAG TTCAGCCTCA CGGCCCAGCC CACGAGCCTG
CCCTACACCC CGGCCAGAAA GACCCCCAAA CCCCGCACGA CCGGCCCGCA GACCGCCGTC
GTGGTCGGCC CGGCCGGTGA AGAAATCTGG ACCGACGAAT ACGGCCGCAT CAAGGTGCAG
TTCCACTGGG ACCGGCTGGG GGCGATGGAC GAGAACTCCA TCTGCTGGAT GCGGGTGGCC
ACGAGCTGGG CGGGCTCGGG CTTCGGGGCG ATCTCGATCC CGCGCATTGG GCACGAAGTG
GTGGTCGACT TCCTCAACGG CGATCCGGAC TACCCGCTGG TCGTGGGCTG CGTCTACAAC
GCCGCCAACA TGCCGCCCTG GGCACTGCCG GGCAATGCCA CGCAGTCGGG CATCAAGACC
AAATCCAGCA AGGGCGGGGC GTTCGGTGAC GGGATGAAGA ACGGCGCGGG CGACGCCAAC
GCGATCCGCT TCGAGGACAA GAAGGGCGCG GAGCAGGTGT GGCTGCATGC GCAGAAGGAC
CAGCTCATCG AGGTGGAGAA CGATGAGGAC CACTGGGTGG GCCAGGACCG CCGAAAAACG
ATCGACCGGG ACGAGACGAA CACCATCCAC CGGGACCGGA CCGAGACGGT CGATCGCAAC
GAGAAGATCA CGGTGCATGG CTGGCGCACC GAGGAGGTCG ATGGCGACGA GACCATCACC
ATCCACTCCA ACCGCACGGA GCGGGTGGAC CACAACGAGA CGATCTCGAT CGGCGACAAC
CGCGACGAGA CCGTGGGCGC CAACGAAGAC ATCCGCATCG GCAGCCACCG CAGCAAGACC
GTCGGGCAGA GCGAGAAGGA CCGCATCGGC ACCAGCTGGA ACATCCGGGT GGGCACCATG
AAGACCGAGA CCATCGGGAT GACGGCCATG CAGAACGTGG GCCTGGCCAA GATGGTGAAC
GTGGGGCTGG CCTACAGCGT CAACATCGGC GGCGTGCGCA ACGACATAGT GGGCGCGAAC
TGGACCCGCA CGGTCATCGG CAGCGACTCG GTGAGCGTGG GCTCGGACCG CAAGGCGAGC
GTGAGCGGCA CGGACAGCCT GGAGGTGTCG GGCGCGCTCA CGGTGAAGGC CAGGACCATC
ACGCTGGAGG CGGGCGACGA GATCACGCTG CGCTGCGGAT CGAGCACGGT GCGGCTGACG
CCCGCGCTCA TCGAAGTGCT GTCCTCGCTG GACAAGCTCA ACTGCTAG
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| Protein sequence | MTRRVTIRTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE
GGKRYLDGLV TRFGMQGQDH RLYSYHLRLQ PWLWVATRRQ DFRIFQFKTV PQIVQEVLGR
YGYPLQLKLT RAYRAWDYCV QYGESDFDFV SRLLEHEGAY YYFQHASGQH TLVIADDIVA
GHEPLPGAAV IPFYPPEKSA VADRENIHAW TLGEEIKPGR YYNDDYDFKK PRSDLSNMRQ
QPPGHAHDAY EIYEWPGGYV QHGDGEQYAR VRLQEGLTGH STVRGESRHR SLAPGYTFTL
ENYPRGDQNR QYLITGVTYH LHENPRSSSF NSAKPGETLK HNEEHGSFQK FSLTAQPTSL
PYTPARKTPK PRTTGPQTAV VVGPAGEEIW TDEYGRIKVQ FHWDRLGAMD ENSICWMRVA
TSWAGSGFGA ISIPRIGHEV VVDFLNGDPD YPLVVGCVYN AANMPPWALP GNATQSGIKT
KSSKGGAFGD GMKNGAGDAN AIRFEDKKGA EQVWLHAQKD QLIEVENDED HWVGQDRRKT
IDRDETNTIH RDRTETVDRN EKITVHGWRT EEVDGDETIT IHSNRTERVD HNETISIGDN
RDETVGANED IRIGSHRSKT VGQSEKDRIG TSWNIRVGTM KTETIGMTAM QNVGLAKMVN
VGLAYSVNIG GVRNDIVGAN WTRTVIGSDS VSVGSDRKAS VSGTDSLEVS GALTVKARTI
TLEAGDEITL RCGSSTVRLT PALIEVLSSL DKLNC
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