Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3710 |
Symbol | |
ID | 4665905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4087653 |
End bp | 4088321 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639824901 |
Product | peptidase M50 |
Protein accession | YP_972031 |
Protein GI | 120612353 |
COG category | [R] General function prediction only |
COG ID | [COG1994] Zn-dependent proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.204012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTCT CCAATCTCAT CCAAACCATC CTCATCTACG CCCTGCCGGT GCTCTTCGCG ATCACCGTGC ACGAGGCGGC GCACGGCTAC GCCGCGCGTC ACTTCGGCGA CAACACCGCG TTGATGATGG GGCGCATCAC GCTCAATCCG CTCAAGCACA TCGATCCGGT GGGCACGATC CTGATGCCGC TGCTGCTGTA TTTCGCGACG TCGGGCACCT TCCTGTTCGG CTACGCCAAG CCGGTGCCGG TGAATTTCGG GCACCTGCGC AACCCCAAGC GGGACATGAT CTGGGTCGCG CTCGCGGGGC CGGCCTCCAA CTTCGTGCAG GCGGTGCTGT GGGCCGTGCT GCTGGTGATG CTGGTGGGCT TCGGGGTGGA CGAGCGCTTC TTCATGGAGA TGGCGCGCGC CGGCGTGCTG GTGAACCTCG TCATGTGGGC GTTCAACCTG TTCCCCCTGC CGCCGCTGGA CGGCGGGCGC ATCCTGGTGG GGCTGCTGCC CTGGCGGCAG GCCAGCTGGC TCTCGCGCAT CGAGCCCTAC GGCTTCTTCA TCGTGCTGGC GCTGGTGGTG GCGGGTATCG TGGGCACGGT GTGGCTGCGG CCGCTGATGT CCCTGGGCTA TTCGGCCATC AACCTGCTGC TCACGCCGCT CACGGCCCTG CTGGGCTGA
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Protein sequence | MDFSNLIQTI LIYALPVLFA ITVHEAAHGY AARHFGDNTA LMMGRITLNP LKHIDPVGTI LMPLLLYFAT SGTFLFGYAK PVPVNFGHLR NPKRDMIWVA LAGPASNFVQ AVLWAVLLVM LVGFGVDERF FMEMARAGVL VNLVMWAFNL FPLPPLDGGR ILVGLLPWRQ ASWLSRIEPY GFFIVLALVV AGIVGTVWLR PLMSLGYSAI NLLLTPLTAL LG
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