Gene Aave_3710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3710 
Symbol 
ID4665905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4087653 
End bp4088321 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID639824901 
Productpeptidase M50 
Protein accessionYP_972031 
Protein GI120612353 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.204012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTCT CCAATCTCAT CCAAACCATC CTCATCTACG CCCTGCCGGT GCTCTTCGCG 
ATCACCGTGC ACGAGGCGGC GCACGGCTAC GCCGCGCGTC ACTTCGGCGA CAACACCGCG
TTGATGATGG GGCGCATCAC GCTCAATCCG CTCAAGCACA TCGATCCGGT GGGCACGATC
CTGATGCCGC TGCTGCTGTA TTTCGCGACG TCGGGCACCT TCCTGTTCGG CTACGCCAAG
CCGGTGCCGG TGAATTTCGG GCACCTGCGC AACCCCAAGC GGGACATGAT CTGGGTCGCG
CTCGCGGGGC CGGCCTCCAA CTTCGTGCAG GCGGTGCTGT GGGCCGTGCT GCTGGTGATG
CTGGTGGGCT TCGGGGTGGA CGAGCGCTTC TTCATGGAGA TGGCGCGCGC CGGCGTGCTG
GTGAACCTCG TCATGTGGGC GTTCAACCTG TTCCCCCTGC CGCCGCTGGA CGGCGGGCGC
ATCCTGGTGG GGCTGCTGCC CTGGCGGCAG GCCAGCTGGC TCTCGCGCAT CGAGCCCTAC
GGCTTCTTCA TCGTGCTGGC GCTGGTGGTG GCGGGTATCG TGGGCACGGT GTGGCTGCGG
CCGCTGATGT CCCTGGGCTA TTCGGCCATC AACCTGCTGC TCACGCCGCT CACGGCCCTG
CTGGGCTGA
 
Protein sequence
MDFSNLIQTI LIYALPVLFA ITVHEAAHGY AARHFGDNTA LMMGRITLNP LKHIDPVGTI 
LMPLLLYFAT SGTFLFGYAK PVPVNFGHLR NPKRDMIWVA LAGPASNFVQ AVLWAVLLVM
LVGFGVDERF FMEMARAGVL VNLVMWAFNL FPLPPLDGGR ILVGLLPWRQ ASWLSRIEPY
GFFIVLALVV AGIVGTVWLR PLMSLGYSAI NLLLTPLTAL LG