Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3697 |
Symbol | mscL |
ID | 4666374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4074172 |
End bp | 4074603 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639824889 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_972019 |
Protein GI | 120612341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.93238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.982216 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTG CGAAGGAGTT CCGGGAGTTC GCGGTGAAGG GAAATGTGAT AGATCTCGCC GTAGGCGTGA TCATCGGCGG CGCGTTCGGG AAGATCGTGG ACTCGCTCGT GAACGACGTC ATCATGCCCA TCGTCGGGCT GGTATTCGGC AGGCTGGATT TCTCGAATCT CTTTCTCGTG CTCGGCAGTG TGCCGCCCGG CACCCCGGCC ACGCTGGACG CCCTGCGCAA GGCGGGCGTA CCCGTGCTCG CCCACGGCAG TTTCATTACC GTCGCGGTGA ACTTCCTGAT TCTCGCGTTC ATCATTTTCA TGATGGTCAA GCAAATCAAC CGGCTCAAGC GCGCGGCGCC GCCCGCACCG CCCGCCACCC CGGCCGCGCC GCCGGAGGAC ATCGTGCTGC TGCGCGAGAT CCGCGACAGT CTCAGGCGCT GA
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Protein sequence | MGIAKEFREF AVKGNVIDLA VGVIIGGAFG KIVDSLVNDV IMPIVGLVFG RLDFSNLFLV LGSVPPGTPA TLDALRKAGV PVLAHGSFIT VAVNFLILAF IIFMMVKQIN RLKRAAPPAP PATPAAPPED IVLLREIRDS LRR
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