| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3607 |
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| Symbol | |
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| ID | 4666644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3980323 |
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| End bp | 3982077 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639824799 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_971932 |
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| Protein GI | 120612254 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.277474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGTGCG CACTGTATGC CGTGGCGGCG CCCTCTTTCG CGGCCCCGGC TGCTCCCCCG
CCCCCCTCCG CGCGAACCCA GCAGACGGAA CTGCAGGTGG AGAACATCCC CAACAGCGAA
GCGCGCGCAG CCCTGGATGC CGAACTGTTC TACGACATCC TCGTCGGCGA ACTGAGCACC
AGCCAGGGAG ACCCCGGCAC CGGCTATGCC CTCATGCTCG AAGCGGCCCG GCGCAGCGGC
GACGCCCAGC TCTACCGGCG CGCGACGGAC ATCGCGCTGC AGTCGCGCTC CGGCGAATAC
GCCCTGGCGG CAGCGCGTGC CTGGAAGGAA GCCCAGCCGC AATCGCGCGA GGCCAATCGC
TACGTGCTGC AGATCCTCAT CGCGCTCAAC CGCATCCACG AGACGGGCGA CCTGCTGCGG
CAGGAACTGG CGCAGTCTCC GCCGAAGGAC CGGCTGCTGT CACTCCAGGC CATTCCGCAA
CTGTACGGAC GCGCATCTGA CAAGGCAGCC GCGGCCGCCA TCGTCGAGAA GGCCCTGGCG
GACCAGTTGC AGAACCCGGC GACCGGGCCG CTCGCCTGGA CGGCGCTGGG GCGGATGCGG
CTCGCTGCCG GCGACCGCAA GGGCGCGCTC GAGGCCGCCC GCAACGCCCT GGCGCAGGAG
CCCACGCTGG ACGCGGCGGC CCTGCTCTCG CTGCAGCTCG TCGAGGCGGG AGAAGCCGAC
GCCGAGCCGC TGGTGGCCCG GTACATGGGC GGCAAGCCCC AGCCGGAGAT CCGCATGGCC
TACGCGGGGG TCCTCCTCAA CCTGCAGCGC TATTCGGAGG CCGGGACGCA GCTGGACCTG
CTCACGCGGG AAGCCCCGGA CATGGCCGAG GCCTGGCTGC TGAAAGCGAC CCTGGCCCTG
CAATCCGACC GCCTGCAGGA ATCCGAATCG GCGCTGGAAC AGTTCGAACG CCTGCTGCAG
TCCTATCCGC CCACGGACCC GCGCAAGGCC GCCATGGGCC AGGCCTACCT GCTGCGCTCG
CAGATCGCCG AAAAGCGCGG CGACCTCGCC CAGGCGGAAG CCTGGCTCGG AAAAATCGAG
AATTCATCCG AACTCCTGGC CGCTCAGACG CGGCGCGCTT CGCTGCTGGC GCGGCAGGGC
AAACTGAACG AAGGCATCGC GCTGATCCGC CGCCTGCCGG CCCGAAACCC GGTGGAAGAA
CGCCAGAAGC TCGTGGCCGA GGCGCAACTG CTGCGCGACG CCAAGCAGTA CCAGCAGGCG
TTCGAGGTGC AGGGCAAGGC CGTGGCGATG GCGCCGGGCG ATTACGACCT GGCATACGAC
CAGGCCATGC TGGCCGAGAA GGCCGGCGAC CTGGCCGGCA TGGAGCGGCT GCTGCGCCAG
ATCATCGAAA AGCGCCCCGA CTACCACCAC GCCTACAACG CGCTCGGTTA TTCGCTGGCC
GAGCGTGGCA TCCGCCTCCA GGAAGCCCGG CAACTGATCC AGAAGGCCCT GACCTACGCG
CCCAGGGATC CGTTCATCAC CGACAGCCTG GGCTGGGTGG AGTTCCGCCT GGGCAATCAC
GCCGAGGCCG CGCGGCTGTT GAACGAAGCC TTCCAGCGCC AGCCCGACCC CGAGATCGCG
GCCCACCTGG GCGAGGTGCT GTGGACCATG GGCGAGCGCT CCAGGGCCCT GCAGGTCTGG
CGCACCGGAC TGCAGCTGAA CAAGGACAAC GAAACGCTGC AGGAAACCAT CAAGCGGCTG
AAGGCCGCCC CGTGA
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| Protein sequence | MLCALYAVAA PSFAAPAAPP PPSARTQQTE LQVENIPNSE ARAALDAELF YDILVGELST
SQGDPGTGYA LMLEAARRSG DAQLYRRATD IALQSRSGEY ALAAARAWKE AQPQSREANR
YVLQILIALN RIHETGDLLR QELAQSPPKD RLLSLQAIPQ LYGRASDKAA AAAIVEKALA
DQLQNPATGP LAWTALGRMR LAAGDRKGAL EAARNALAQE PTLDAAALLS LQLVEAGEAD
AEPLVARYMG GKPQPEIRMA YAGVLLNLQR YSEAGTQLDL LTREAPDMAE AWLLKATLAL
QSDRLQESES ALEQFERLLQ SYPPTDPRKA AMGQAYLLRS QIAEKRGDLA QAEAWLGKIE
NSSELLAAQT RRASLLARQG KLNEGIALIR RLPARNPVEE RQKLVAEAQL LRDAKQYQQA
FEVQGKAVAM APGDYDLAYD QAMLAEKAGD LAGMERLLRQ IIEKRPDYHH AYNALGYSLA
ERGIRLQEAR QLIQKALTYA PRDPFITDSL GWVEFRLGNH AEAARLLNEA FQRQPDPEIA
AHLGEVLWTM GERSRALQVW RTGLQLNKDN ETLQETIKRL KAAP
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