| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3597 |
|---|
| Symbol | |
|---|
| ID | 4667681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 3968210 |
|---|
| End bp | 3968806 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639824789 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971922 |
|---|
| Protein GI | 120612244 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000848869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCAG CAGGGCCTCC CGGCAAAGAG GCTGACGACA AGGGCAATCC GTCAGCTGGC
ACGAAGCCCA GTAGCGGCGA GGGCTCTGGC ACTGGGGGAG TTGGGCGCAC GCCGAGCCAG
GGTAGCGGCG GCAATGCTGG TGGTCCTGCA GGTGCTGCCT TCGGTGGCTC CGGTAACAAG
CCCGGCGACA AGCCGGACGG GACCACGAAC AAGCCTGGAG ACGGCAAAGA GCAAGCCGCG
TGCGGTGCCC CTGGGCAGCC CAAGTGCGCG ATTGACGAAA CGGGCACGCC CAAGGTGTCC
CCGAATGAGT ACGACAAGGC GGTCGATCAA TACAAGATCG ACATGGACGC TATCCGCGCG
AAGGTCGCTG GGACGGAAGA CAAGAGCTAC TTCGAAGGCT GGAAATCGAT GTGGTTCGCT
CCTGCGGTTG CTGCCTGTCA GCCCTTTGCT TTGCCCTCTG TGCTCGGCGT CTCGCTCGCC
ATTGATCCCT GCGCAGTCGT GGAGGGCATC CGCTACTTCA TGGCGTATGT CTGGGCCATC
GTCGGGCTCG CCATCTGCGT CCAAATGATC GGTCGGACTA TCCGGGGGAG TGCTTGA
|
|---|
| Protein sequence | MQPAGPPGKE ADDKGNPSAG TKPSSGEGSG TGGVGRTPSQ GSGGNAGGPA GAAFGGSGNK
PGDKPDGTTN KPGDGKEQAA CGAPGQPKCA IDETGTPKVS PNEYDKAVDQ YKIDMDAIRA
KVAGTEDKSY FEGWKSMWFA PAVAACQPFA LPSVLGVSLA IDPCAVVEGI RYFMAYVWAI
VGLAICVQMI GRTIRGSA
|
|---|
| |