| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3582 |
|---|
| Symbol | |
|---|
| ID | 4667737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3953425 |
|---|
| End bp | 3954336 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639824773 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971907 |
|---|
| Protein GI | 120612229 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1561] Uncharacterized stress-induced protein |
|---|
| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0102309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.126925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTT ACAGCATGAC CGGCTACGCG AGCGCCCAGC TCGAAGCCTC CGCCACCGAT
GCCGACAGCG GTGCCCGCCC CGCGCGCCTG GGTATCGAGA TCCGCTCCGT CAACAGCCGC
TTCCTGGATC TCTCCTTCCG CCTGCCCGAT GAACTCCGGG CCCAGGAACC CGGCCTGCGC
GCCCTCGTCA CGCAGCATCT CAAGCGCGGC AAGGTGGAGG TGCGCGCCTC CATCGAATCG
GAGGCCCAGG GCCTCATCGC TCCGCCCTCC GCGCGCATGC TGCAGCAACT CAACTCGGCG
CAGGATTCCG TCCGCGCCTG GCTGCCGTCC GCCGCGCCAC TGTCCGTGGC CGACGCGCTG
CGCCTGTGCG CGGGTTCCGC GGCGTCCTCC GCGTCCTGGA GCCCCGAGGG CATCCAGGCC
CTCGCCCAGC GGGCACTGGA AGACCTGGTG GCGGCGCGCG AGCGCGAGGG CAAGCGGCTC
TCCGCCATGC TGCAGGACCG CCTGAAGCAA CTGCGCGACC TGGCACGACA GGCCGCGCCC
CTGGTGCCCC AGCTCGTGGA CCAGCAGCGC CAGCGTTTCC TGGAGCGCTG GAAGGAAGCC
ATGGCGCTGA CCGAAGGCGT GCCGGTGCCC GAAGCCGCAC AGGACCGCGC CCTCGCGGAA
GCCACCGCTT TCGCCATCCG CATCGACGTC GCGGAAGAGA TCACGCGCCT CGACTCCCAC
CTCGACGAGA TCGAGCGCCT GCTGAAGAAG GGCGGGGAGA TCGGCAAGCG GCTGGACTTC
CTCATCCAGG AACTGCACCG CGAGGCCAAT ACCCTCGGCT CCAAGTCCGC CGCCATGGAA
CTGACCCGCA TCAGCGTGGA CATGAAAGTG CTCATCGAGC AGATGCGCGA GCAGGTCCAG
AACATCGAGT GA
|
|---|
| Protein sequence | MAVYSMTGYA SAQLEASATD ADSGARPARL GIEIRSVNSR FLDLSFRLPD ELRAQEPGLR
ALVTQHLKRG KVEVRASIES EAQGLIAPPS ARMLQQLNSA QDSVRAWLPS AAPLSVADAL
RLCAGSAASS ASWSPEGIQA LAQRALEDLV AAREREGKRL SAMLQDRLKQ LRDLARQAAP
LVPQLVDQQR QRFLERWKEA MALTEGVPVP EAAQDRALAE ATAFAIRIDV AEEITRLDSH
LDEIERLLKK GGEIGKRLDF LIQELHREAN TLGSKSAAME LTRISVDMKV LIEQMREQVQ
NIE
|
|---|
| |