Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3515 |
Symbol | |
ID | 4666485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3886776 |
End bp | 3887456 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824709 |
Product | GntR family transcriptional regulator |
Protein accession | YP_971844 |
Protein GI | 120612166 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.715745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.6161 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAT CCCCCGTACA GAACCTGACG GACCGCGTCA GCGACCAGAT CCGCCGCCGC ATCGTGGCCG GCGAGCTGGC CCCGGGCCAG CGCCTGTCCG AGGCCGCGCT GGCCGAGAGC CTGGAGATTT CGCGCAACAC CCTGCGCGAG GTGTTCCGGC TGCTCACCAA GGAGGGCCTG CTCCGGCACG AACCCAACCG CGGCGTGTCG GTGGCGGTGC CCAGCATCGC GTCCATCATC GACATCTACC GCGTGCGCCG GCTCATCGAA TGCCAGGCGC TGGCCCAGGC CTATCCGCGC CACCCCGCCA AGAAGCACCT GCGCGAGGCG GTGGACAACG CCCTGCGCTG CCGCGACGCG GGCGACTGGC AGGGCGCGGG CACGGCGAAC ATGGAGTTCC ACATGGCCGT GGTGGAACTG GCCGACAGCG AACGCCTGAA CGTGATGTTC TCCCATCTGC TGGCCGAGCT GCGCCTGGCC TTCGGGCTGC TCAAGGACGC GGAATTCCTG CACGCGCCCT ACGTGGAGAT GAACGTGAAG ATCGTCGAGC TGTTCGAGGC CGGCAGGCTG CAGGAGGCCT CGGCCGCCCT GCACGACTAC CTGGTGCATT CGGAACGCAT CGTGCTGGCC GTGTACGCGC GGCGGATCTC CGAGCCGGGG CTGGAGCGCG GCACCCGCTG A
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Protein sequence | MSESPVQNLT DRVSDQIRRR IVAGELAPGQ RLSEAALAES LEISRNTLRE VFRLLTKEGL LRHEPNRGVS VAVPSIASII DIYRVRRLIE CQALAQAYPR HPAKKHLREA VDNALRCRDA GDWQGAGTAN MEFHMAVVEL ADSERLNVMF SHLLAELRLA FGLLKDAEFL HAPYVEMNVK IVELFEAGRL QEASAALHDY LVHSERIVLA VYARRISEPG LERGTR
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