| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3486 |
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| Symbol | |
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| ID | 4669881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3850004 |
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| End bp | 3852328 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639824680 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_971815 |
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| Protein GI | 120612137 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.740933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.610265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT CCGGACGCCC CTGGGAGAGC AGCTGCAATT CAGGCAGCTG
CGGGGTAGCG AGGAGCTGAG CCAGCTTTTC TCCTTCGACA TCGACCTGCT CTCGGAAGGC
CGCGACATCG ATCCCAAGGC CTTGCTCGGC AAGACAGCGA CGGTGGAGAT CGAGACCGAA
GGCGGCGGCA AGCGGTACCT GGACGGCCTG GTCACGCGCT TCGGCATGCA GGGGCAGGAC
CATCGGCTGT ACTCCTACCA CCTGCGCCTG CAGCCCTGGC TCTGGGTGGC CACGCGGCGG
CAGGACTTCC GCATCTTCCA GTTCAAGACC GTCCCGCAGA TCGTGCAGGA GGTGCTGGGC
CGCTACGGTT ATCCGCTGCA GTTGAAGCTC ACGCGCGCGT ACCGCGCCTG GGACTACTGC
GTGCAGTACG GCGAGAGCGA CTTCGACTTC GTCTCCCGCC TCTTGGAGCA TGAGGGCGCG
TACTACTACT TCCAGCACGC GAGCGGCCAG CACACCCTGG TGATCGCCGA TGACATCGTG
GCCGGGCACG AACCGCTGCC GGGCGCGGCG GTGATCCCGT TCTACCCGCC TGAGAAGTCG
GCCGTGGCCG ACCGCGAGAA CATCCATGCC TGGACGCTGG GCGAGGAGAT CAAGCCGGGC
CGGTACTACA ACGACGACTA CGACTTCAAG AAGCCGAGGT CGGACCTGTC CAACATGCGC
CAGCAGCCTC CGGGCCATGC GCACGATGCC TACGAGATCT ACGAATGGCC GGGCGGCTAC
GTGCAGCACG GCGACGGCGA GCAGTACGCC CGCGTGCGGC TGCAGGAAGG CCTGACCGGG
CACAGCACCG TCAGGGGCGA ATCGCGCCAC AGGAGCCTGG CGCCGGGCTA CACCTTCACG
CTGGAGAACT ACCCGCGCGG CGACCAGAAC CGGCAGTACC TCATCACCGG CGTCACCTAC
CACCTGCACG AGAACCCGCG GACATCTTCA GCCAACAGCG CCAGGCCCGG CGAGACGCTC
AAGCACAACG AAGAGCACGG CTCCTTCCAG AAGTTCAGCC TCACGGCCCA GCCCACGAGC
CTGCCCTATA CCCCCGCCAG AAAGACCCCG AAGCCGCGCA CCACCGGCCC GCAGACCGCC
GTCGTGGTCG GCCCGGCCGG GGAAGAAATC TGGACCGACG AATACGGCCG CATCAAGGTG
CAGTTCCACT GGGACCGGCT GGGGGCGATG GACGAGAACT CCAGTTGCTG GATGCGGGTG
GCCACGAGCT GGGCGGGCTC GGGCTTCGGT GCGATCTCGA TCCCACGCAT TGGCCAAGAA
GTCATAGTGG ACTTCCTGAA CGGCGACCCC GACTATCCCA TCGTCACCGG CAGCGTCTAT
AACGCCGCGA ACATGCCGCC CTGGGCCTTG CCGGGCAACG CCACGCAGTC GGGCATCAAG
ACGAAGTCCA GCAAGGGCGG GGCGTTCGGC GACGGGATGA AGAACGGCGC GGGCGATGCC
AACGCGATCT GCTTCGAGGA CAAGAAGGGC GCGGAGCAGG TGTGGCTGCA TGCGCAGAAG
GACCAGCTCA CCGAAGTCGA GAACGATGAG GATAAGTGGG TGGGAAATGA CCGGCGAAAA
ACGATCGACC GGGACGAGAC CACCATCGTG CATCGCGACC GGACAGAAAC TGTGGACCGC
GACGAGAAGA TCACGGTGCA CAACAACCGC ACGGAGCGGG TGGACCATGA CGAGACGATC
TCGATCGGCG ACAACCGGAA CGAAGATGTC GGCATCGACG AGACGGTTTC CATCGGCAAG
AACCGCACGA AGACCATCGG CCGCAACGAG AAGGACAGGA TCGGCAACAA CTGGTCGATC
AAGGTCGGCA GCTTCAAGAC CGAAACCATC GGCCTGGCCT ACATGCAGAA CGTGGGCCTG
GCCAAGATGG TGAACATCGG CGCGGCCTAC AACGTGAACG TGGGCGCGGC GATGGTGGTG
AACGTGGGGC TCAACCAGTC CACCAACGTG CTCATGAACC GGTCCGTCAC CGTGGGACAG
AGCCAGACCA CGAAGGTCGG CGCGGATCGC ACGGACGAGA CGTCCGACAA CTACACGGAG
AACGTGGGCA AGAACTCGGC CACCACCGTG GGCGAAGTGC GCACCCTGAG CGTGGGCAAG
GAAATGTCCG TCAAGGTCGG CGACGCGATC GAGATCCAGT GCGGCAAGGC CGTGCTGCGC
ATGACCAGCG ACGGCACGGT GCAGATCAAC GGGCAGACGA TTTCCATCGC GGGCAGCTCC
AAGGTGACGG TCTCGTCGCC GGACAGCCAC GTCAATCCTG CGTGA
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| Protein sequence | MTRRVTIRTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG RDIDPKALLG KTATVEIETE
GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT VPQIVQEVLG
RYGYPLQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ HTLVIADDIV
AGHEPLPGAA VIPFYPPEKS AVADRENIHA WTLGEEIKPG RYYNDDYDFK KPRSDLSNMR
QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSTVRGESRH RSLAPGYTFT
LENYPRGDQN RQYLITGVTY HLHENPRTSS ANSARPGETL KHNEEHGSFQ KFSLTAQPTS
LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM DENSSCWMRV
ATSWAGSGFG AISIPRIGQE VIVDFLNGDP DYPIVTGSVY NAANMPPWAL PGNATQSGIK
TKSSKGGAFG DGMKNGAGDA NAICFEDKKG AEQVWLHAQK DQLTEVENDE DKWVGNDRRK
TIDRDETTIV HRDRTETVDR DEKITVHNNR TERVDHDETI SIGDNRNEDV GIDETVSIGK
NRTKTIGRNE KDRIGNNWSI KVGSFKTETI GLAYMQNVGL AKMVNIGAAY NVNVGAAMVV
NVGLNQSTNV LMNRSVTVGQ SQTTKVGADR TDETSDNYTE NVGKNSATTV GEVRTLSVGK
EMSVKVGDAI EIQCGKAVLR MTSDGTVQIN GQTISIAGSS KVTVSSPDSH VNPA
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