Gene Aave_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3438 
Symbol 
ID4669125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3796323 
End bp3797021 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content73% 
IMG OID639824634 
Producthypothetical protein 
Protein accessionYP_971769 
Protein GI120612091 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.333291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG ATCCCCGCCT CCAGCCCCTG ACCGCCGCCG AAGCCCGCGT GCTCGGCACC 
CTGATGGAAA AGGCCCGCAC GGTGCCCGAC AGCTATCCGC TCACCCTGAA TGCCGTGGTG
ACCGGCTGCA ACCAGAAATC GAGCCGGGAT CCGGTGACCA CGCTTTCCGA CGCCGAAGTG
CAGGAAGCGC TGGACAGCCT GCGCCGCCGC GCGATGGTGG TGGAGATCGG CGGCCAGCGC
GCCACCCGCT GGGAGCACAA CTTCACGCGC GCGGCGGGCG TTCCCGACCA GTCCGCGGCC
CTGCTCGGGC TGCTGATGCT GCGCGGCCCG CAGACGGCGG GCGAGTTGCG CATCAATGCC
GAGCGCTGGC ACCGTTTCGC CGACATCTCA TCGGTCGAGG CGTTCCTGGA CGAGCTGCAG
TCGCGCAGCG AGGAAAAAGG CGGCCCGCTG GTGGCCCTGC TGCCGCGCGC GCCGGGCGCC
CGCGAATCGC GCTGGACGCA CCTGCTCTGC GGCCCTTTGA GCGCCGCCGA CATGGCCGCG
CAGGCGGCGC AGGCCGCGGC CCCGACATCT TCCGCCCGGG CGGCCGATCC GGCGCTGGCC
GAGCGTGTCG CGGCCCTGGA GGCCGAGGTA GCGGCTCTGC GGGGATCGCT GGCGGCGCTC
TGCGGCCAGC TCGGGGTGTC GCTCCCCGGA CAGCCATAA
 
Protein sequence
MPFDPRLQPL TAAEARVLGT LMEKARTVPD SYPLTLNAVV TGCNQKSSRD PVTTLSDAEV 
QEALDSLRRR AMVVEIGGQR ATRWEHNFTR AAGVPDQSAA LLGLLMLRGP QTAGELRINA
ERWHRFADIS SVEAFLDELQ SRSEEKGGPL VALLPRAPGA RESRWTHLLC GPLSAADMAA
QAAQAAAPTS SARAADPALA ERVAALEAEV AALRGSLAAL CGQLGVSLPG QP