Gene Aave_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3413 
Symbol 
ID4668603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3768959 
End bp3769963 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID639824609 
Productaminodeoxychorismate lyase 
Protein accessionYP_971744 
Protein GI120612066 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCG CGGCGGCCGG CCTGGGTTTC TGGTGGCTCC ACCATCCGCT GCCGCAGCGA 
GCGGCCGCGG GCGCCGCCAC GGCCGGGGGC ACCCCCGGCG TGCTGGAGCT CGAGATCGAG
CCCGGCACCA CGCCGCGCGG TGTCGCCGTG GCCGCCGTGC AGGCCGGCGT GGATACCGAT
CCGCGCCTTC TCTATGCCTG GTTCCGCCTG TCGGGCAAGG ACCGGCTGAT CAAGGCCGGC
AACTATGAGA TCCCGCCGGG CACCACCCCC TTCGGCCTGC TGCAGAAACT CGTGCGCGGC
GAGGAGGCAC TGCGCGCCGT CACGCTCGTG GAGGGCTGGA CCTTCCGCCA GTTCCGCGCC
GCGCTGGACC GCGACGAAGC GCTGCGCCAC GACACCCAGG GCCTGGCCGA CGCCGCCATC
ATGGAGCGCC TGGGCCGCCC CGGGGTGCCG CCGGAGGGGC GCTTCTTCCC TGACACCTAC
ACCTTCGCCA AGGGTACGAG CGATCTCGCG GTGATGCGGC GGGCCCTGCG CGCCATGGAT
CGCAGGCTGG AAGCCGCATG GGCGCAGCGC TCCGCCGACC TGCCGCTCAA GAGCGCCGAC
GAGGCCCTCA TCCTCGCGAG CATCGTCGAG AAGGAAACCG GCCGCGCCTC CGACCGCGGC
CAGATCGCCG GCGTCTTCGT CAACCGGCTG AAGGCGGGCA TGCTGCTGCA GACCGATCCC
ACGGTCATCT ACGGCATGGG CGAAAAGTTC GACGGCAACC TGCGCCGCCG CGACCTGCTG
GCCGATACGC CCTGGAACAC CTACACACGT GCCGGCCTGC CGCCCACACC CATTTCGATG
CCGGGCAAGG CTTCGCTCAT CGCCGCCGTG CAGCCCGAGC GCACGCAGGC CCTCTATTTC
GTGGCGCGGG GCGACGGCAC CAGCCACTTC AGCCCCACGC TCGACGAACA CAACCGCGCG
GTGAACCGCT ACCAGCGCGG CCAGCCGGCG CCGCAGGGGC AGTAA
 
Protein sequence
MAFAAAGLGF WWLHHPLPQR AAAGAATAGG TPGVLELEIE PGTTPRGVAV AAVQAGVDTD 
PRLLYAWFRL SGKDRLIKAG NYEIPPGTTP FGLLQKLVRG EEALRAVTLV EGWTFRQFRA
ALDRDEALRH DTQGLADAAI MERLGRPGVP PEGRFFPDTY TFAKGTSDLA VMRRALRAMD
RRLEAAWAQR SADLPLKSAD EALILASIVE KETGRASDRG QIAGVFVNRL KAGMLLQTDP
TVIYGMGEKF DGNLRRRDLL ADTPWNTYTR AGLPPTPISM PGKASLIAAV QPERTQALYF
VARGDGTSHF SPTLDEHNRA VNRYQRGQPA PQGQ