Gene Aave_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3388 
Symbol 
ID4667310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3744484 
End bp3745335 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content76% 
IMG OID639824584 
Productcytochrome c553-like protein 
Protein accessionYP_971720 
Protein GI120612042 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.152505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCT TACCCCCAGG CCCGCCCTGG CCTGCATTCC TTTCTTTCCT GCTGCACCGT 
TGCACGGCCC GGCTCCGGGC CGGGCGGGTG GGGAGGGCAG GGTGCCGGGC GGCGGCCGTG
GCGCTGGCGG CTCTGTCGGG CGGCGCCGGC CCTGCCGCAG CGCAGGCACC CGCCAGTGCC
CCGGTGCCCG CCACGCAGGC GCAGGCGCCG GCCGCCGGCA TGGCCGACCG GGTCATCGCC
TGCACGGCCT GCCACGGCCG GGAAGGGCGG GCGACCCAGC AGGGCTACTT TCCGCGCATC
GCCGGCAAAC CCGCGGGCTA CCTGTACCAC CAGCTCCTGA ACTTCCGCGA CGGGCGCCGG
AGCTATCCGC AGATGTCCTA CCTGCTCGAG CACATGACGG ACGACTATCT GCGCGAGATC
GCCCGGCATT TCTCCGCGCT GGACCTTCCC TACGCCGCGC CGCCTCCGCC CCAGGCCCCC
CCGGCGACGC TGGAGCGGGG CCGCCGGCTG GTGCGCGAGG GCGATGCCCG CCGCGGCATA
CCCGCCTGCG TCCAATGCCA CGGCGGCGCC ATGACCGGCG TGCAGCCGGC CATCCCTGCG
CTCGTCGGCC TGCCGCGCGA CTACCTCAAC AGCCAGATCG GCGCCTGGCA GACCGGCCAG
CGCCGCTCGC AGGCGCCCGA TTGCATGGCC CGCGTGGCGC GGCAGCTCAC GGCCGAGGAT
GTGAGCGCCA TCTCGGCCTG GCTCGCCGCC CAGCCGGTGG CCGGCAGCGG CAAGCCCGCG
GACGCACCCG CCGGCCCGTT GCCCATGCCC TGCGGCGGCG TGGACGTGTC CGCCAGGGGG
AGCACGCCAT GA
 
Protein sequence
MPPLPPGPPW PAFLSFLLHR CTARLRAGRV GRAGCRAAAV ALAALSGGAG PAAAQAPASA 
PVPATQAQAP AAGMADRVIA CTACHGREGR ATQQGYFPRI AGKPAGYLYH QLLNFRDGRR
SYPQMSYLLE HMTDDYLREI ARHFSALDLP YAAPPPPQAP PATLERGRRL VREGDARRGI
PACVQCHGGA MTGVQPAIPA LVGLPRDYLN SQIGAWQTGQ RRSQAPDCMA RVARQLTAED
VSAISAWLAA QPVAGSGKPA DAPAGPLPMP CGGVDVSARG STP