| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3381 |
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| Symbol | truB |
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| ID | 4667768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3736001 |
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| End bp | 3736999 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639824577 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_971713 |
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| Protein GI | 120612035 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.092575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.759632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GCGCTCCCCG CATCCGGGTG CAGCGGCGCC CGGTGCACGG AGTGCTTCTG
CTCGACAAGC CCCTTGGCCT TTCCAGCAAC GATGCGTTGC AGAAGGCCAA GTGGCTGCTG
CGCGCCGAAA AGGCCGGCCA CACCGGCACG CTCGATCCTC TGGCCTCTGG CGTGCTGCCG
CTGTGCTTCG GCGCGGCCAC CAAGTTCAGC CAGCTGCAGC TCGATGCGCC CAAGACCTAC
GAGGCCGTCG CCCGGCTCGG CGTGACCACG ACCACGGGCG ACGCGGAAGG CGACGTGGTG
GAGCGCCGGG AGGTGGATGC CTCGCAGCTC GCCGCCGCGC GCCTGGCCGA GGTGCAGCGG
CAGTTCACCG GCCCCATCCG GCAGTTGCCG CCGATGCACA GCGCCCTCAA GAAGGATGGC
AAGGCGCTGT ACGAATACGC CCGCGCGGGC ATCGCCGTCG AGCGCGAGGC GCGCGACGTG
GTGATCCATG CGCTGGAACT GTCGCTGGCA GCGGACCAGG GCGGCGAGCC TGCCGTGCGC
ATGGTCGTGA CCTGCAGCAA GGGCACCTAC ATCCGCACGC TGGGCGAGGA CGTGGGCGCC
GCACTGGGTT GCGGCGCGCA CCTCGTCTTC CTGCGCCGTA TCGACACCGG CGGGCTGGGC
GTGGAGCGCT GCATCACGCT CGCCGCGCTC GAAGCGCTGG ACGAGGCCGG GCGCATGGCC
TGCGTGCAGC CGGTGGAAAC GCTACTCGCG GGGCATGCAT CTGTCACGCT GGACCATGAC
AATACGGCGC GATTCCTCTC CGGCATGCGC CGCCGCGGCC CCTGGCCCGA CGCGCCCGCC
GTGGCGGTGT TCGGCCAGCA TCCCCGCGCC CTGCTGGGCG TCGGCCGGGT GGCGGCCGGC
GAACTCATCC CCGAGCGCCT CCTGAGCCCC CAGGAGATCG CACAGATTCT GGAAAGCACG
CCGCGGGCAG AGCGCGGCAC ATTGGAACCC ACTCTATGA
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| Protein sequence | MTARAPRIRV QRRPVHGVLL LDKPLGLSSN DALQKAKWLL RAEKAGHTGT LDPLASGVLP
LCFGAATKFS QLQLDAPKTY EAVARLGVTT TTGDAEGDVV ERREVDASQL AAARLAEVQR
QFTGPIRQLP PMHSALKKDG KALYEYARAG IAVEREARDV VIHALELSLA ADQGGEPAVR
MVVTCSKGTY IRTLGEDVGA ALGCGAHLVF LRRIDTGGLG VERCITLAAL EALDEAGRMA
CVQPVETLLA GHASVTLDHD NTARFLSGMR RRGPWPDAPA VAVFGQHPRA LLGVGRVAAG
ELIPERLLSP QEIAQILEST PRAERGTLEP TL
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