| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3377 |
|---|
| Symbol | |
|---|
| ID | 4666948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3730218 |
|---|
| End bp | 3731102 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 639824573 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_971709 |
|---|
| Protein GI | 120612031 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CGCGCACCCC CTGCCCCGAC GGCGCTCTGC ATCGCGCCCC ATCCGGTGCC
CCGGATACCG GTCTGGATGA CGACCGCCTG CACGCGCTGG TGGATGGCCG TCTCCCGGAC
GACGAAGCAC AGGCGCTGCG CCGCCGGCTG GCGGACGACC CTTGCACCCG GGAGCGCGTG
CGAGCCTGGG AAGCCCAGCG TGCGCAGCTG CGCGCGCTGC ATGCGGACTG GACGCAGGCG
CCGGTTCCAC CGCCGCTCCT GCAGGCGGCG CGGGCCTTGC GCAACCGCCG CCTGCAGGTG
GCGCGGGCCT GGCGCATGGC CGGTCTTGCG GCCTCGCTGG CGCTCGCCTT CGGGCTGGGG
TGGACGCTGC ACGGCACGGT TTCGCCCGGC GATCCGGCCT CCGCCACGCT GGCACGCTCG
GCACCCTCGC CATTGCCGCC GACCCAGCGT TTCGCGCTGC AGGCCGCCGC GGCCCACGCG
GTGTACCAGC CCGAGCAGCG CCATCCGGTG GAGGTCGGCG CAGCACAGCA GGAACATCTG
GTGCAGTGGC TCTCCAAACG CCTGGGCAAG CCGCTGCGCA TTCCCGACCT GCAGCCCCAG
GGCTATGAAC TGGTGGGCGG GCGCCTGCTG CCGGGCGATG CGGGACCGGG CGGCGCCACC
GGCGCGCGGG CGCAGTTCAT GTACCAGAAC GCCGCGGGGC AGCGCGTCAC GCTGTACCTC
GGCGCGCTGC CCGCGGCCCC CGCGGAAACC GCCTTCCGTT ACGAAGGCGA CGGCCCCGTG
CCCAGCTTCT ACTGGGTGGA GGACGGCTTC GGCTACGCGT TGAGCGGCCC GCTGCCCCGC
GAGGCGCTGC TGGCCATCGC CACGGCCGTC CATCCGCAGT TGTGA
|
|---|
| Protein sequence | MTDPRTPCPD GALHRAPSGA PDTGLDDDRL HALVDGRLPD DEAQALRRRL ADDPCTRERV
RAWEAQRAQL RALHADWTQA PVPPPLLQAA RALRNRRLQV ARAWRMAGLA ASLALAFGLG
WTLHGTVSPG DPASATLARS APSPLPPTQR FALQAAAAHA VYQPEQRHPV EVGAAQQEHL
VQWLSKRLGK PLRIPDLQPQ GYELVGGRLL PGDAGPGGAT GARAQFMYQN AAGQRVTLYL
GALPAAPAET AFRYEGDGPV PSFYWVEDGF GYALSGPLPR EALLAIATAV HPQL
|
|---|
| |