| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3347 |
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| Symbol | |
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| ID | 4665922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3700345 |
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| End bp | 3702870 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639824543 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_971679 |
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| Protein GI | 120612001 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.57735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GCGTCACCAT ACAGACGCCC CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG
CAGGGGCGAG AAGAACTGAG CCAGGTTTTC AGCCTCGACA TCGACCTGCT GAGCGAGGAC
AAAAGCATCG ACCCGAAGGC GCTGCTGGGC AAGAGCGCGA CGGTGGTGGT GGAGACCGAA
GGCGGTGGCC GGCGCTACCT CGACGGGATC GTGACGCGCT TCGGCATGCA GGGGCAGGAC
CACCGCTTCT ACGCCTACCG ACTGCGGCTG CAGCCTTGGG TTTGGCTGGC CTCGCGCAAG
AGCGATTTCC GGATATTCCA GAACAAGAGC GTGCCGCAGA TCATCGAAGA GGTGCTGGGC
GCGTACGGAT ATCCGATGGA AAAGAAACTC AGCCGCAGCT ACCGCACATG GGAATACTGC
GTGCAATATG ACGAGAGCGA CCTGCAGTTC GTCTCGCGGC TGATGGAGCA CGAGGGCATC
TATTACTACC ACCAGCATGC GCAGGGCCAG CACACGCTGA CGCTGGCCGA CGACATCGTG
GCCTCGCACC AGCCACTGCC CGGGGCGGCC ACGATTCCGT TCTATCCGCC CGAGAAATCG
GCGGTGGCCG ACCGCGAGAA CATCCACGCC TGGGAGCTGC ACGAGGAGAT CCACTCGGGC
CGCTTCTACA ACGACGACTA CGACTTCAAG AAGCCCAAGG CGGACCTGGC GAACATGCGG
CAGATGCCGC CGGGGCACAG CCACGATGCG TACGAGACGT ACGAGTGGCC CGGGGGCTAC
ACGGAGTTCG GCGACGGCGA GGCCTATGCA CGGGTGCGGC TGCAGGAGAA CCTGAGCGGG
CGCAGCACGG TGCGCGGCGA GTCGCGCCAC CGGTCCCTGG CCACGGGCTA CCTCTTCACG
CTGGAGAACT ACCCGCGCGC AGACCAGAAC CAGCAGTACC TGATCACCGG CCTGCAGTAC
CACTTCAAGG AGAACCCGCG GGTGAGCGCG GCGAACCCTG GGCAGAAGGG CACCGTGCAG
GAAGAGGGCT CGTTCCAGCG CTTCACGCTG CAGGCGCAGC CCACGAGCCT GCCGTACACG
CCGGCACGGG TGACGCCCAA GCCGAAGACC ACGGGGCCGC AGACCGCGGT GGTGGTGGGC
CCGCCGGGCG AGGAGATCTG GCCGGACCAG TACGGGCGGG TGAAGGTGCA GTTCCACTGG
GACCGGCAGG GCAGGTTCGA CGAGCAGTCC AGCTGCTGGA TCCGTGTGTC GCAGGGCTGG
GCAGGGCAGA ACTACGGCAG CATCTACCTG CCGCGCATCG GGCAGGAAGT CATCGTGGAC
TTCTTGTCCG GAGACCCGGA CCAGCCGATC ATCACGGGGC GGGTGTACAA CGCGGACCAG
ATGCCGCCGT GGAAGCTGCC GGAGCACAAG ACGCAGTCGG GCACGCTCAC GCGCTGGAGC
AAGGGTGGGG GCGGGGCGAG CATGCTGCGC TTCGAGGACC AGAAGGGGAT AGAGCACCTG
GAGCTGTCGA ACACGTACGG CAACACGTAC CTGAACATGG GGTACCTGAT GCACCAGGGC
ACGGGGTCGC AGCGGGGGTA TGGCTTCGAG CTGCGCACGG ACCTGTGGGG CTCGATCCGC
GCGGACAAGG GCCTGCTCAT CACCACCTAT CCGCAGGACT TCACGTCCAT GGCGGCCAAC
TTCAACCCGG ACGGCTTCGA CCAGCTGGGC GCGGGCCTGG CCGGCACGGC ATCGCTCATG
CAGCAGGCCA GCCAGGCGGC GCAGACGCTG GACGCGAACC TCGGCGCACT CAACTCGCTC
AAGACCTCGC ACATGATGGA ACTGGGCGCG GGCATCGCGG CCATGACCGG CGCGCAGGCG
ACATCGGCAT CGCTGTCCAA GGCCGCGGCG GCGCTCTCGG CCTTCCAGGG TGGTGGCGGC
GGTGCGCCGG AAGCGGCCCT GCCGTCCGAC ACCGATCCGG CCATGCCGCA GTCGCAGGCG
CTGCGCGAAC TCTCGCGCGA CATCACGCAG CCCATCGTCT CCATCGTGAG CCCGCAGGGC
CACACGATGG TCAGCCCCAA GCCGATCGTC ATCAGCTCCG GCCAGAGCGC GTCGATGCAC
GCCACGCAGC ACATCACGGT TTCCAGCGGC GCGCAGCTCA CGCAGCTCGC CAAGGCCGGC
ATGCTGACGC ACGTCTCCGA AGGCGGGCAG CGCACCACGG TGGGCGCGGG CGACATCGCC
ACCGATGCGC AGACGGGCAA CCTCAACCTC ACCGCCGAGC AGAACGCGAC CCTGGCCTCG
CGCACGGACA CCGCCACCGT CGTGGGCCAG CAGAACGTCA ACCTGCAGGC CACCGAGGAC
TCGGTGCTCG TCAAGGCCGG CCAGCACATC CGCCTGCAGG CGGGCGCGAC GATCACGCTC
ACGGCGGGCG AGGGCGCCTC CATCACGCTC ACCAGCGACG GCAAGGTGGA GATCCGCGGA
AAGAACGGGC TCATCGAGCT CAAGGACGTG CTCACCGTGC TGGGCAAGCC CGTCAACATC
AACTGA
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| Protein sequence | MTRRVTIQTP LGEQLQFRQL QGREELSQVF SLDIDLLSED KSIDPKALLG KSATVVVETE
GGGRRYLDGI VTRFGMQGQD HRFYAYRLRL QPWVWLASRK SDFRIFQNKS VPQIIEEVLG
AYGYPMEKKL SRSYRTWEYC VQYDESDLQF VSRLMEHEGI YYYHQHAQGQ HTLTLADDIV
ASHQPLPGAA TIPFYPPEKS AVADRENIHA WELHEEIHSG RFYNDDYDFK KPKADLANMR
QMPPGHSHDA YETYEWPGGY TEFGDGEAYA RVRLQENLSG RSTVRGESRH RSLATGYLFT
LENYPRADQN QQYLITGLQY HFKENPRVSA ANPGQKGTVQ EEGSFQRFTL QAQPTSLPYT
PARVTPKPKT TGPQTAVVVG PPGEEIWPDQ YGRVKVQFHW DRQGRFDEQS SCWIRVSQGW
AGQNYGSIYL PRIGQEVIVD FLSGDPDQPI ITGRVYNADQ MPPWKLPEHK TQSGTLTRWS
KGGGGASMLR FEDQKGIEHL ELSNTYGNTY LNMGYLMHQG TGSQRGYGFE LRTDLWGSIR
ADKGLLITTY PQDFTSMAAN FNPDGFDQLG AGLAGTASLM QQASQAAQTL DANLGALNSL
KTSHMMELGA GIAAMTGAQA TSASLSKAAA ALSAFQGGGG GAPEAALPSD TDPAMPQSQA
LRELSRDITQ PIVSIVSPQG HTMVSPKPIV ISSGQSASMH ATQHITVSSG AQLTQLAKAG
MLTHVSEGGQ RTTVGAGDIA TDAQTGNLNL TAEQNATLAS RTDTATVVGQ QNVNLQATED
SVLVKAGQHI RLQAGATITL TAGEGASITL TSDGKVEIRG KNGLIELKDV LTVLGKPVNI
N
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