| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3312 |
|---|
| Symbol | |
|---|
| ID | 4668916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3663846 |
|---|
| End bp | 3664562 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639824510 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_971646 |
|---|
| Protein GI | 120611968 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGC ATTTCGGCAT TGCCAACGTA TGGATCCAGG GTGATTTCGT CACCCGGGCC
GTCGCCGTGC TGCTGCTCGG CATGTCGCTC GCCTCGTGGA TCGTCATCCT CATCAAGGCG
CTGGACATCA TCAAGTTCAA GAAACATGCC CGCGGGGCGC GCGACTTCTG GCACAGCGAA
GACTTCGCCG CCGGCATGGA AAAGCTGGGC AACGATCCGT CGAATCCGTT CCGGCATCTC
GCGCTCGAAG GTCGCGAAGC CACCGCGCAC CACCGCAACA CCAAGGCGCA CCTGCACGAC
AGCCTCGACG TGAGCGACTG GATCACGCGC AGCCTGCGCA ACTGCATCGA CGAATTCACC
GCCCGCCTGC AGTCGGGCCT GGCGGTCCTG GCTTCGGTCG GATCCACCGC GCCGTTCATC
GGCCTCTTCG GCACCGTCTG GGGCATCTAC CACGCCCTCG TGGCGATCGG CGCATCCGGC
CAGTCCACCA TCGACAAGGT GGCCGGCCCC ATCGGCGAGG CGCTCATCAT GACCGCGCTG
GGCCTGGCGG TGGCCATCCC CGCGGTGCTG GGCTACAACG CGCTGGTGCG GGGCAACAAG
TCCATCCTGA ACGGCCTCAA CAGCTTCGCG CATGACCTGC ACGCCTACTT CGTGACCGGC
GCCCGCGTCA GCGCCCCTGC CGACCAGGGC AAGGTCCTGC CCATCAAGAA AGGCTGA
|
|---|
| Protein sequence | MESHFGIANV WIQGDFVTRA VAVLLLGMSL ASWIVILIKA LDIIKFKKHA RGARDFWHSE
DFAAGMEKLG NDPSNPFRHL ALEGREATAH HRNTKAHLHD SLDVSDWITR SLRNCIDEFT
ARLQSGLAVL ASVGSTAPFI GLFGTVWGIY HALVAIGASG QSTIDKVAGP IGEALIMTAL
GLAVAIPAVL GYNALVRGNK SILNGLNSFA HDLHAYFVTG ARVSAPADQG KVLPIKKG
|
|---|
| |