Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3200 |
Symbol | |
ID | 4669095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3528345 |
End bp | 3529136 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639824399 |
Product | iojap-like protein |
Protein accession | YP_971536 |
Protein GI | 120611858 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.188532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCT CCACCCGTTC GGAATCCGCC GCCAAGAAGG ACGTCACGAA ACTCCAGCGC GCCATCGTCG ATGGCCTGGA GGACGTCAAG GCGCAAGACA TCCAGGTGTT CAACACCGAG AAGCTGTCGC CGCTCTTCGA GCGGGTCATC GTGGCGTCGG GCACGTCCAA CCGGCAGACC AAGGCCCTGG CCGCCAGCGT GCGCGACGCC GTGCGCGAGG CGGGCTTCCC CAAGCCGCGC ACCGAGGGCG AGGACAACGG CGAATGGATC ATCGTGGACT GCGGCGCCGC CGTGGCCCAC ATCATGCAGC CGGCCATCCG CCAGTACTAC CGCCTGGAAG AGATCTGGGG CGAGACGCCG GTGCGCCTGA AGCTCGGTGC CGCCAAGCCC GTGAAGGCCG CCGAATCCGG CGATGCCGCG CCCGCGAAGA AGAAAGCCGC GCCGCGCAAG AAGGCCGCGG CGGCCGAAGC GGAAGTGCCG GCACGCAAGC CGGGCCGCGG CAAGGCCACC GCCGCTGCCC CCGCTCCGGC TCCCGCCAGG AAGGCTGCCG GCAAGGCCGC GCCCGCGAAG GCCGCTGCCG CCAAGGCTCC GGCCAAGGCC CCCGCCAGGG CGCCTGCGAA AGCCGCCGCC GGCAAGTCGC CCGCAGCCAA GTCCGCGGCA CCGAAGGTGA AGACCGTGGT CGTGAAGCCC GTGGCCCGCA AGCCCGCCGC GAAGTCCGCT GCCGCGAAGG CGCCGGCGGC TCCGCGCAAG GCTGCCGCCA GGAAGGCCCC GTCCCGCAAG AAGGCCGGCT GA
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Protein sequence | MTTSTRSESA AKKDVTKLQR AIVDGLEDVK AQDIQVFNTE KLSPLFERVI VASGTSNRQT KALAASVRDA VREAGFPKPR TEGEDNGEWI IVDCGAAVAH IMQPAIRQYY RLEEIWGETP VRLKLGAAKP VKAAESGDAA PAKKKAAPRK KAAAAEAEVP ARKPGRGKAT AAAPAPAPAR KAAGKAAPAK AAAAKAPAKA PARAPAKAAA GKSPAAKSAA PKVKTVVVKP VARKPAAKSA AAKAPAAPRK AAARKAPSRK KAG
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