Gene Aave_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3200 
Symbol 
ID4669095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3528345 
End bp3529136 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content72% 
IMG OID639824399 
Productiojap-like protein 
Protein accessionYP_971536 
Protein GI120611858 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.188532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT CCACCCGTTC GGAATCCGCC GCCAAGAAGG ACGTCACGAA ACTCCAGCGC 
GCCATCGTCG ATGGCCTGGA GGACGTCAAG GCGCAAGACA TCCAGGTGTT CAACACCGAG
AAGCTGTCGC CGCTCTTCGA GCGGGTCATC GTGGCGTCGG GCACGTCCAA CCGGCAGACC
AAGGCCCTGG CCGCCAGCGT GCGCGACGCC GTGCGCGAGG CGGGCTTCCC CAAGCCGCGC
ACCGAGGGCG AGGACAACGG CGAATGGATC ATCGTGGACT GCGGCGCCGC CGTGGCCCAC
ATCATGCAGC CGGCCATCCG CCAGTACTAC CGCCTGGAAG AGATCTGGGG CGAGACGCCG
GTGCGCCTGA AGCTCGGTGC CGCCAAGCCC GTGAAGGCCG CCGAATCCGG CGATGCCGCG
CCCGCGAAGA AGAAAGCCGC GCCGCGCAAG AAGGCCGCGG CGGCCGAAGC GGAAGTGCCG
GCACGCAAGC CGGGCCGCGG CAAGGCCACC GCCGCTGCCC CCGCTCCGGC TCCCGCCAGG
AAGGCTGCCG GCAAGGCCGC GCCCGCGAAG GCCGCTGCCG CCAAGGCTCC GGCCAAGGCC
CCCGCCAGGG CGCCTGCGAA AGCCGCCGCC GGCAAGTCGC CCGCAGCCAA GTCCGCGGCA
CCGAAGGTGA AGACCGTGGT CGTGAAGCCC GTGGCCCGCA AGCCCGCCGC GAAGTCCGCT
GCCGCGAAGG CGCCGGCGGC TCCGCGCAAG GCTGCCGCCA GGAAGGCCCC GTCCCGCAAG
AAGGCCGGCT GA
 
Protein sequence
MTTSTRSESA AKKDVTKLQR AIVDGLEDVK AQDIQVFNTE KLSPLFERVI VASGTSNRQT 
KALAASVRDA VREAGFPKPR TEGEDNGEWI IVDCGAAVAH IMQPAIRQYY RLEEIWGETP
VRLKLGAAKP VKAAESGDAA PAKKKAAPRK KAAAAEAEVP ARKPGRGKAT AAAPAPAPAR
KAAGKAAPAK AAAAKAPAKA PARAPAKAAA GKSPAAKSAA PKVKTVVVKP VARKPAAKSA
AAKAPAAPRK AAARKAPSRK KAG