Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3167 |
Symbol | |
ID | 4666942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3496197 |
End bp | 3497366 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639824367 |
Product | putative aminotransferase |
Protein accession | YP_971504 |
Protein GI | 120611826 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0026749 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CCGCTGCCGC GCGCACGCCG GCCCTCCCCA GCAAGCTGCC CCAGGTGGGC ACGACCATCT TTGCCGTGAT GTCCGCCCTG GCGGCGGAGC ACGGCGCCGT GAACCTGGGC CAGGGCTTTC CCGATTTCGA CTGCGATCCG GCCCTGGTCG ATGCGGTGGC CGGCGCCATG CGCGCGGGCC ACAACCAGTA CCCGCCGATG CCGGGCGTGC CGGCGCTGCG CCAGGCCGTG GCGCGCAAGA TCGAGGCGCT GCATGGCCGC GCCTATTCGC CGGACACCGA AATCACCGTG ACGGCCGGCG CCACGCAGGG CATCCTGACG GCGATCCTGG CCGTGGTGCA GGCGGGCGAC GAGGTGATCG TGCTCGATCC CTGCTACGAC AGCTACGTGC CCAACGTGGA GCTGGCGGGC GGCACGGCGG TGCGCGTGCC GCTCACGCCC GGCACCTTCC GCCCGGATTT CGGCCGCATC GCCGCCGCGC TCACGCCGCG CACGCGCGCG ATCATTGTCA ACACGCCGCA CAACCCCTCG GCCACCGTAT GGACGGACGA GGACATGCGG GCACTCGAAG CGCTGCTCGC GCCCACCGAC GTGGTCGTGG TCAGCGACGA GGTCTACGAG CACATGGTGT TCGACGGTGC GGAGCACCAG AGCGTCGCGC GCTTCCCCGG GCTGGCCGCG CGAGCGTTCA TCGTGTCGAG CTTCGGCAAG ACCTTCCACG TCACGGGCTG GAAGGTGGGC ACGGTGGTCG CACCCGCGCC GCTCATGGCC GAGTTCCGCA AGGTGCACCA GTTCAACGTG TTCACGGTGA ACACGCCCGT GCAGCATGGC CTGGCGGCCT ACCTGGCCGA TCCGGCGCCC TACCGGCAGC TGCCGGCCTT CTACCAGGCC AAGCGCGACC TGTTCCGCCA GGGGCTGGAA GGCTCGCGCC TGAAACTGCT GCCCAGCACC GGCAGCTACT TCCAGTGCGT GGACATCTCG CAGGTGAGCG ACCTGGGCGA CGTGGAGTTC TGCCAGTGGC TCACGCGCGA GATCGGCGTG GCCGGCATCC CGCTGTCGCC GTTCTACGGC GACGGGTTCG ATCAGCGCGT GGTGCGCTTC TGCTTCGCCA AGCGCGACGA GACGCTGCGC GAGGCGCTGC AGCGGCTGCG CCGGCTCTGA
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Protein sequence | MTTTAAARTP ALPSKLPQVG TTIFAVMSAL AAEHGAVNLG QGFPDFDCDP ALVDAVAGAM RAGHNQYPPM PGVPALRQAV ARKIEALHGR AYSPDTEITV TAGATQGILT AILAVVQAGD EVIVLDPCYD SYVPNVELAG GTAVRVPLTP GTFRPDFGRI AAALTPRTRA IIVNTPHNPS ATVWTDEDMR ALEALLAPTD VVVVSDEVYE HMVFDGAEHQ SVARFPGLAA RAFIVSSFGK TFHVTGWKVG TVVAPAPLMA EFRKVHQFNV FTVNTPVQHG LAAYLADPAP YRQLPAFYQA KRDLFRQGLE GSRLKLLPST GSYFQCVDIS QVSDLGDVEF CQWLTREIGV AGIPLSPFYG DGFDQRVVRF CFAKRDETLR EALQRLRRL
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