Gene Aave_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3146 
Symbol 
ID4668539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3472134 
End bp3472508 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content67% 
IMG OID639824347 
Productglycine cleavage system H protein 
Protein accessionYP_971484 
Protein GI120611806 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.372329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.912262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA AGTATTCCCG CGACCACGAG TGGATCAACG CCGCCGACAC GGGCGCCGCC 
ATCGTCGGCA TCACCGTCCA TGCGCAGGAC GCGCTGGGCG ACGTGGTGTT CGTCGATCTG
CCCGAGGTGG GCAAGACCTT CGCTCAGGGC GAGGTGGCCG GCGTGGTCGA GTCCGTGAAG
GCCGCTGCCG ACGTGTACAT GCCCGTGTCC GGCGAGATCG TCGAAGTGAA CGAGGCGCTG
CGCGCCGATC CGTCGCTCGC CAACAGCGCG CCGCTGGGCG ACGGCTGGTT CTTCAAGGTG
CGCCTGTCCG ATGCGTCGCA GCTCGACGCG CTCATGGACG AGACGGCCTA CACCGAGTTC
TCCAAGAACG CCTGA
 
Protein sequence
MTVKYSRDHE WINAADTGAA IVGITVHAQD ALGDVVFVDL PEVGKTFAQG EVAGVVESVK 
AAADVYMPVS GEIVEVNEAL RADPSLANSA PLGDGWFFKV RLSDASQLDA LMDETAYTEF
SKNA