Gene Aave_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3120 
Symbol 
ID4666321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3442615 
End bp3444267 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content69% 
IMG OID639824321 
ProductNAD+ synthetase 
Protein accessionYP_971458 
Protein GI120611780 
COG category[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG0171] NAD synthase
[COG0388] Predicted amidohydrolase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCG TCATCAGCAT CGCGCAATTC AACTTCATCG TCGGCGATGT CGAAGGCAAT 
GCCCGAAAGA TCATCTCCGC CGCCCATGAG GCCCACGCCC AGGGTGCCGC GCTGCTGCTC
ACTCCCGAAC TGGCCCTGTG CGGCTATGCC GCCGAGGATC TCTTCCTGCG CCCCGCGTTC
CTCGATGCCT GCGACCGGGC GCTGCAGGAC ATCGCGCAGG CCACGGCGGC ATGCGGCGAC
CTGGCGGTGG TGGTCGGCCA CCCGTGGCGC AGCGTGGCCG GTGGCGCCGA GCGGTGCCAC
AACGCCGCCA GCGTGCTGCG TGGCGGGCGC GTCGAGCAGA CCTACGCCAA GCAGGAACTG
CCCAACTACG CCGTGTTCGA CGAGCAGCGG TATTTCGACC CGGGCACGCA ACCCTGCGTG
TTCGACGTGC AGGGCGTGCG CGTCGGGCTG CTGATCTGCG AGGACGCCTG GTTTCCCGGG
CCGGCGGCCC GCGCGGCGCA GGCGGGCGCC CAGTTGCTCG CGACGCTGAA CGCCTCGCCC
TTCCACCTGG GCAAGAGCGC CGAGCGCGAG CAGATCATGC GCGAACGTGT TGCGGAAACG
GGGCTGCCCC TGGTCTATGC CCACCTGGTG GGCGGGCAGG ACGAGGTGGT CTTCGAAGGC
CGCTCGTTCG CGCTGGATGC CACCGGCTTC GTCGGCGTCC GCGCGCCGGG CTTCGCCGAA
GCGCTGGTGC GGGTCGTGGC GCGTGCCGAA GACGGCGTGC TCCGGTTCGA GCCCGACGTG
GCGCCCATTC CCGCGCCCGA GGCCGATCTC TGGAGCGCAC TGGTGCTGGG CGTGCGCGAC
TACGTGGGCA AGAACGGATT CCCGGGCGTG CTGCTGGGCC TGTCCGGCGG CATCGATTCG
GCGCTGGTGC TCGCCATCGC GGTGGACGCG CTCGGCCCCG ACAAGGTGCG CGCGGTGATG
ATGCCTTCGC CCTATACGGC CGACATCAGC TGGATCGATG CGCGCGACAT GGCCGAGCGG
CTCGGCGTGC GCTATGACGA GATCGCCATC GCCCCGCAGT TCGAGGCCTT CAAGGCCGCG
CTCGCATCCG AGTTCGCCGG GCGTGCGGAA GACGCCACCG AGGAAAACCT GCAGGCGCGC
ATCCGCGGCA CGCTGCTCAT GGCGCTGTCC AACAAGTTCG GCTCGGTCGT GCTCACCACC
GGCAACAAGA GCGAAATGGC CACGGGCTAT TGCACGCTCT ACGGCGACAT GGCCGGCGGC
TTCGCGGTCA TCAAGGACGT GGCCAAGACG ACCGTCTATG GACTGGCGCG GTGGCGCAAT
GCGCACGACC CCTTCGGCAC CGGCGCCTCG CCCATTCCCG AACGCATCAT CACCCGCCCG
CCGAGCGCGG AGCTGCGGCC GGACCAGAAG GACCAGGACA GCCTGCCGCC CTACGACGTG
CTGGACGCCA TCGTCGGGCG CTACATGGAA AACGACGAAC CCATCGAGTC CATCATCGCC
GCGGGTTACG CGCGCGCGGA CGTCGAGCGC GTCACCCGTC TCATCCAGGT CAACGAGTAC
AAGCGCCGGC AATCCCCCGT CGGCATCCGC GTCACCCGCC GCAGCTTCGG CAAGGACTGG
CGCTACCCGA TCACCAACCG TTTCCGGGCC TGA
 
Protein sequence
MPFVISIAQF NFIVGDVEGN ARKIISAAHE AHAQGAALLL TPELALCGYA AEDLFLRPAF 
LDACDRALQD IAQATAACGD LAVVVGHPWR SVAGGAERCH NAASVLRGGR VEQTYAKQEL
PNYAVFDEQR YFDPGTQPCV FDVQGVRVGL LICEDAWFPG PAARAAQAGA QLLATLNASP
FHLGKSAERE QIMRERVAET GLPLVYAHLV GGQDEVVFEG RSFALDATGF VGVRAPGFAE
ALVRVVARAE DGVLRFEPDV APIPAPEADL WSALVLGVRD YVGKNGFPGV LLGLSGGIDS
ALVLAIAVDA LGPDKVRAVM MPSPYTADIS WIDARDMAER LGVRYDEIAI APQFEAFKAA
LASEFAGRAE DATEENLQAR IRGTLLMALS NKFGSVVLTT GNKSEMATGY CTLYGDMAGG
FAVIKDVAKT TVYGLARWRN AHDPFGTGAS PIPERIITRP PSAELRPDQK DQDSLPPYDV
LDAIVGRYME NDEPIESIIA AGYARADVER VTRLIQVNEY KRRQSPVGIR VTRRSFGKDW
RYPITNRFRA