Gene Aave_3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3077 
Symbol 
ID4666342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3391875 
End bp3393149 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content69% 
IMG OID639824278 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_971417 
Protein GI120611739 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.765136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.228122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG ACTACTCCCC CAAGACCAAG GACCTGCAGG CGCGCCTGCT GAAGTTCATG 
GACGAGCACA TCTACCCGTC CGAAGCCGCC TACACCGCGG AACTGGCGGC CAACACGGCC
GCGGGCCGGC GCTGGACGGC GCTCGACACC ATCGAGAAGC TGAAACCCAA AGCCCGCGCG
GCCGGCCTCT GGAACCTGTT CCTGCCGGTG GATTCCGCCG CGGCCTCGGG CTATGAAGGC
GCCGGGCTCA CCAACCAGGA ATACGCACCG CTCGCCGAGA TCATGGGCCG CGTGCCCTGG
GCCAGCGAAG TGTTCAACTG CTCCGCGCCC GACACGGGCA ATATGGAAAC CATCGCCCGC
TACGGCAGCG AGGAGAACAA GGCCCGCTGG CTGCGCCCGC TGCTGGAAGG CGAGATCCGC
TCGGCGTTCG CGATGACCGA ACCCGACGTG GCCTCCAGCG ATGCGACCAA CATCTCCACC
CGCATCGAGC GCCAGGGCGA CGAGTACGTC ATCAACGGCC GCAAGTGGTG GATCTCCGGC
GCGGCCGACC CGCGCTGCAA GGTCTTCATC ACCATGGGCA AGAGCGATCC CGAGGCACCC
AGGCACTCGC AGCAGAGCAT GGTCCTGGTG CCCGCGGACA CGCCCGGCAT CCGCATCCTG
CGCCCGCTCA ACGTGCTGGG CTACGACGAC GCGCCCCACG GCCACGTCGA GATGGTGTTC
GAGAACGTGC GCGTGCCGGC CAGCAACATC CTGCTGGGCG AAGGCCGCGG CTTCGAGATC
GCCCAGGGGC GCCTGGGCCC CGGCCGCATC CACCACTGCA TGCGCCTGAT CGGCCTGGCC
GAGCGCGCAC TGGAGCTGAT GTGCCGCCGC GCGTCCTCGC GCGTCGCCTT CGGCAAGACC
GTGGCCCAGC AGACCGTGAC GCAGGAGCGC ATCGCCGAGG CCCGCTGCAA GATCGACATG
GCCCGCCTGC TCACGCTCAA GGCCGCCTGG CTCATGGACG TGGCCGGCAA CAAGGTCGCC
AAGACCGAGA TCGCGATGAT CAAGGTGGTG GCCCCCAGCA TGGCCTGCCA GGTGATCGAC
TGGGCCATGC AGGTGCATGG CGGCGGCGGC ATGTGCGACG ACTTCCCGCT CGCCTATGCC
TATGCCGGCG CGCGCACCCT GCGCTTCGCG GACGGCCCGG ACGAGGTGCA CCGCAACGCC
ATCGCGAAGT GGGAGCTGGG CAAGTACTCG GCCTATGGGC GGGGGGTCGA GGTGCCGGTC
ACGCGCGGCT GCTGA
 
Protein sequence
MDFDYSPKTK DLQARLLKFM DEHIYPSEAA YTAELAANTA AGRRWTALDT IEKLKPKARA 
AGLWNLFLPV DSAAASGYEG AGLTNQEYAP LAEIMGRVPW ASEVFNCSAP DTGNMETIAR
YGSEENKARW LRPLLEGEIR SAFAMTEPDV ASSDATNIST RIERQGDEYV INGRKWWISG
AADPRCKVFI TMGKSDPEAP RHSQQSMVLV PADTPGIRIL RPLNVLGYDD APHGHVEMVF
ENVRVPASNI LLGEGRGFEI AQGRLGPGRI HHCMRLIGLA ERALELMCRR ASSRVAFGKT
VAQQTVTQER IAEARCKIDM ARLLTLKAAW LMDVAGNKVA KTEIAMIKVV APSMACQVID
WAMQVHGGGG MCDDFPLAYA YAGARTLRFA DGPDEVHRNA IAKWELGKYS AYGRGVEVPV
TRGC