Gene Aave_3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3075 
Symbol 
ID4666636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3389948 
End bp3390667 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content66% 
IMG OID639824276 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_971415 
Protein GI120611737 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.193734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC CCATTCTTAC CATCGAAGAA CGAGAGGCGA TCAATACCGG TCGCTGGTTT 
TCCTCCCTTT CCCCTTCGCT GCGGCACGAC ATACTCCGAT GCGCCTACGT CAAACGCTTC
AAGGATGGCG GCCTGATCGC CGCCCGCGGC GATCCGCCCG AGGAATGGAT CGCCTGCGCG
AAGGGCGCGG TGCGCGTGAG CTCCACGTCG ATCTCCGGCA AGCAGATCAC GCTGACCTAC
GTGGAGCCGG GCATCTGGTT CGGCGACGTG GCGATCTTCG ACGGCGACCG TCGCACGCAC
GATGCCTACG CGCACGGGGA CACCACCATC CTCTGCGTGG CCAAGGCGGA TTTCCGCAAG
ATCCTGGCCA CGCACGTGGA GTTCTACGAA GCGATGCTGC GCCTGCATGC GCGGCGCATC
CGCCAGCTCT ACGGCCTGGT GGAGGATCTC AACACCCTGC CCTTGCGCGC GCGCCTGGCC
AAGCAGCTGC TGCACCTCGT GCGCAGCTAC GGCATCCCCA GCCTGTCGCA GGGCGACGAG
ATCCGCATCG GCCTGCAGCT GGCGCAGGAA GAACTGGCGC AGCTGCTGGG CGCATCGCGC
CAGCGCGTGA ACCAGGAACT GAAGGCCATG GAGCGCGAGG ACGCCATCCG CATCGAGCCG
GGCGGCCTGG TCGTGCGCGA CCGTGACGTC CTGATGCGCA TCGCCGAAGC CGACCACTGA
 
Protein sequence
MDDPILTIEE REAINTGRWF SSLSPSLRHD ILRCAYVKRF KDGGLIAARG DPPEEWIACA 
KGAVRVSSTS ISGKQITLTY VEPGIWFGDV AIFDGDRRTH DAYAHGDTTI LCVAKADFRK
ILATHVEFYE AMLRLHARRI RQLYGLVEDL NTLPLRARLA KQLLHLVRSY GIPSLSQGDE
IRIGLQLAQE ELAQLLGASR QRVNQELKAM EREDAIRIEP GGLVVRDRDV LMRIAEADH