| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3068 |
|---|
| Symbol | |
|---|
| ID | 4668207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3381911 |
|---|
| End bp | 3383029 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824269 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_971408 |
|---|
| Protein GI | 120611730 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0186757 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.325054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC TGCTGTCCCC GCATTCCTCC ATCGCCATCC TGGGCGCCGG CCTCATGGGC
CGGCTGCTGG CCGCCGAGCT GGCGCGGCAG GGGCACGCCG TGGAGGTGTA CGAGGCCCAG
GGCCCCGACG CCCAGGGCGC GGCCGCCCGC ATCGCCGCCG CCATGCTCGC GCCGCTGGCG
GAATCCGCCA TCACCGAAGC CGGCGTGGTC CGCATGGGGC ACCATGCCCT GTCGCGCTGG
CCCCAGCTGC TGGCCGGCCT CGAGTGGCCC GTGTTCTTCC AGCAGGAGGG CACCCTCATC
CTCTGGCACC GCCAGGATGC CGCCGAGGCC GCGCGGCTGC GCGGCGTGCT GGAGCGCACG
GCCCGCACCG TTCCCGAACT GCCGGCCCTC CAGGTGCTGG ACGGCAGGGA ACTGCAGGAG
GCCGAGCCCG CCCTCCAGGG ACAGCGCTTC CACCAGGGCC TGTACCTGCC CGGAGAGGGC
CAGCTCGACA ATCGCCAGTT GCTCGCGGCG CTGGAGCACG CCATGCGCGC ACGCGGCGTC
CGGGTGCACT GGCACCACCC GCGCACGCCG GAAGATTTCA CGCCGGGCAT GCCCGGCCAG
CCCGACTGGG TGCTGGACTG CCGGGGCCTG GGCGCCCTGG CCCAGTGGTC CGAACTGCGC
GGGGTGCGCG GCGAGGTGGT CCGCCTGCAC GCGCCCGGCG TGGCGCTGCG CCGGCCCACC
CGGCTGGTGC ATCCGCGCTA CCCCATCTAC ATCGCCCCCA AGCAGGACCA CGTCTTCGTG
ATCGGCGCCA CCGAGATCGA ATCGGACGAC CTCTCGCCCG CGAGCGTGCG CTCCACCCTG
GAACTGTTGA GCGCGGCCTA TGCCGTGCAT CCCGGATTCG CCGAGGCCCG CATCCTCGAG
ATCGCCACCC AGTGCCGTCC CACCCTGCCC GACAACCTGC CCGCGGTGCG GCGCACCGCG
CCGCGCGTTC TGCAGGTGAA CGGCCTGTAC CGGCACGGCT TCATGATTTC CCCGGCCATC
CTGGACGTGG TGATGGAATG CCTGAACGAA GGACAATCAC CCCTCGCCTC CCGCTTCGAC
CTGGCGCTGG ACCTCGAGTC CGCCGCCGCA CTGCCATGA
|
|---|
| Protein sequence | MTALLSPHSS IAILGAGLMG RLLAAELARQ GHAVEVYEAQ GPDAQGAAAR IAAAMLAPLA
ESAITEAGVV RMGHHALSRW PQLLAGLEWP VFFQQEGTLI LWHRQDAAEA ARLRGVLERT
ARTVPELPAL QVLDGRELQE AEPALQGQRF HQGLYLPGEG QLDNRQLLAA LEHAMRARGV
RVHWHHPRTP EDFTPGMPGQ PDWVLDCRGL GALAQWSELR GVRGEVVRLH APGVALRRPT
RLVHPRYPIY IAPKQDHVFV IGATEIESDD LSPASVRSTL ELLSAAYAVH PGFAEARILE
IATQCRPTLP DNLPAVRRTA PRVLQVNGLY RHGFMISPAI LDVVMECLNE GQSPLASRFD
LALDLESAAA LP
|
|---|
| |