Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3048 |
Symbol | |
ID | 4669010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3357410 |
End bp | 3359317 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639824250 |
Product | hypothetical protein |
Protein accession | YP_971389 |
Protein GI | 120611711 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.115559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0258128 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAC CCATCGACTG GCTCCCCGAC GGCACCCCGT TCAATCCGCG CTTCGGCGAC CGCTACCACA GCCACACCGG GCTCGCGCAG GCACGCGAAG TCTTCCTGCG CGGCTGCGGC CTGCCCGGGG CGTGGGCCGG CCAGGCGATG TGGCGGGTGC TGGAGACCGG CTTCGGCTGC GGGCTGAATT TCCTCGCCAC CTGGGCCGCC TGGCGGGCCG ACCCGGCGCG GCCCCGGCTG CTGCATTTCG TGTCCTGCGA AGCGTTTCCC GTCTCAGCGG ACGACCTGCT GCGCTCCATG CAGGGGCATG GCGAGCTGGA ACCCCTGGCC CGCGCGCTGC ATGCGCAGTA CTGGGGCCTG CTGCCCGGCG TGCACCGGCT CGCCTTCGAG GGCGGGCAGG TGCTGCTCAC GCTCTACATC GGCGACGCGC AGGCGATGCT GCGCCAGCAG CAGCCGGTGG CCGATGCGGT GTACCTGGAC GGCTTCAGCC CGCAGGTGAA CCCGGAGCTG TGGGACGTGC ACACGCTCAA GGCCGTGGCG CGCTGCTGCC GCCGCGGCAC GCGCCTGGCC ACCTGGAGCG TGGCCGGCGC GGTGCGCGAA GGGCTCGCGC AGTGCGGTTT CCGGGTGCAG AAGGTGCCCG GCCTGCCCCC GAAGCGCAGC AACCTGCAGG CGGAGTTCGA TCCGGCCTGG GAGCCGCGCC CCGTGCAGCC GGAGCTGCCC GACGTGCGCG TGGCGGGCGG ACCGTCGAGC GTGCTGGTCA TCGGCGGAGG GCTGTCGGGC GCCGCCGTGG CGGCGAGCCT CGCGCGGCGC GGCTGGCAGG TGCGGGTGCT GGACCAGGGC GCGGAACCCG CGGCCGGCGC CTCGGGCCTG CCGGCCGGCG TGTTCGCGCC GCATGTGTCG CCCGACGACA GCCTGCTCTC GCGCCTGTCG CGCTGCGGCG TGCGGGCCAC GCTGCAGGCC CTGGAGGCAT CCGGCCTGTC GGAAGGCGAG GACTGGAGCG CCTGCGGCGT GCTGGAGCAC GAGGTGGATG GCAAGCACCG CCTGCCGCCT GCCTGGGCCG GGGATGCCGC GGTGGGCGCC GAATGGAGCC GCCCCGCCGA TGCCGCGGCG CTGGAGGCCG CTGGCCTGCC CGGAGCCACC GTCGCCTATT GGCATGCGCG TGGCGGATGG CTGCGGCCGG CCCGGCTGGT GCGCGCGCTG CTGGCGCACC CTGGCATCCA CTGGCAGGGC CGCAGTGCCG TGGCACGGCT GGAGCCCGTG GCCGCTCCCG GTGGCGCCAC GCACTGGCAG GCATATGGCA GCGACGGCAC GGTGCTCGCC GAAGCGCCCC ACGTGGTGGT GGCCGCTGGC TACGGCAGCC GCCCCTGGCT ACCCGCCCGC TACCCGATCC ATCCGCTGCG CGGCCAGGTG AGCTGGGGCA CGCGGGCGGA CAGCCCGGCC GCCGCCTGGC CGCCCTTCCC CGTCAACGGC CATGGCAACC TCGTGCCGCA TGCGGGCACG GCGGGGGGAG GCATCTGGGT GATGGGCTCG ACCTTCGAGC GCGGCCAGAC GGAACTGCCC CCCGCGCCCC AGGAACAGGC GCAGGCCCAT GCGGCCAATG CCGCGAAGCT GGAACAACTG CTGCCGGCGC TGGCGCAGGG GCTCGCACCC GCCATCGCCG GCCCGGGCGC CGCCCCCGGC CACTGGGCGG CCGTGCGCTG CACCGCGCCC GACCGGCTGC CTTTCGTGGG GCCGGTGGAT GCCGCACGGC AGGCCGGGCT CTGGGTCTGC GCCGCGATGG GCGCGCGCGG GCTCACGCTG TCGCAGCTGT GCGGGGAACT GCTGGCCGCC CGCATGATGG GCGAGCCGCT GCCTGTGGAG GTGCGTCTGG CGCGGGCGCT GTCCACCGAG CGGCTTCCTG CGGACTGA
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Protein sequence | MSEPIDWLPD GTPFNPRFGD RYHSHTGLAQ AREVFLRGCG LPGAWAGQAM WRVLETGFGC GLNFLATWAA WRADPARPRL LHFVSCEAFP VSADDLLRSM QGHGELEPLA RALHAQYWGL LPGVHRLAFE GGQVLLTLYI GDAQAMLRQQ QPVADAVYLD GFSPQVNPEL WDVHTLKAVA RCCRRGTRLA TWSVAGAVRE GLAQCGFRVQ KVPGLPPKRS NLQAEFDPAW EPRPVQPELP DVRVAGGPSS VLVIGGGLSG AAVAASLARR GWQVRVLDQG AEPAAGASGL PAGVFAPHVS PDDSLLSRLS RCGVRATLQA LEASGLSEGE DWSACGVLEH EVDGKHRLPP AWAGDAAVGA EWSRPADAAA LEAAGLPGAT VAYWHARGGW LRPARLVRAL LAHPGIHWQG RSAVARLEPV AAPGGATHWQ AYGSDGTVLA EAPHVVVAAG YGSRPWLPAR YPIHPLRGQV SWGTRADSPA AAWPPFPVNG HGNLVPHAGT AGGGIWVMGS TFERGQTELP PAPQEQAQAH AANAAKLEQL LPALAQGLAP AIAGPGAAPG HWAAVRCTAP DRLPFVGPVD AARQAGLWVC AAMGARGLTL SQLCGELLAA RMMGEPLPVE VRLARALSTE RLPAD
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