Gene Aave_2992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2992 
SymbolglyA 
ID4668184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3298554 
End bp3299798 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content65% 
IMG OID639824194 
Productserine hydroxymethyltransferase 
Protein accessionYP_971333 
Protein GI120611655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.802435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.346056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAC GCAATATTCT TGTCGAACAA GCCGATCCCG AAGTGTGGGC CGCCATCCAG 
GCCGAGAACC TGCGCCAGGA GCAGCACATC GAACTGATCG CCAGCGAGAA CTACGCCTCG
CCCGCCGTCA TGGCGGCACA GGGCTCGCAG CTCACCAACA AGTACGCCGA AGGCTATCCC
GGCAAGCGCT ACTACGGCGG CTGCGAGAAC GTGGACGTGG TCGAGCAGCT GGCCATCGAC
CGCGTGAAGA AGCTCTTCGG CGCCGATGCC GCCAACGTGC AGCCCAATTC CGGCTCGCAG
GCCAACCAGG CCGTGCTGCT TGCCTTCCTC AAGCCCGGCG ACACCATCCT GGGCATGAGC
CTCGCCGAAG GCGGCCACCT GACCCACGGC ATGCCGCTGA ACATGAGCGG CAAGTGGTTC
AACATCGTGT CGTACGGCCT GAACGAGAAG GAAGAGATCG ACTACGACGC GCTGGAAGCC
AAGGCCCGCG AGCACAAGCC CAAGCTGATC ATCGCCGGTG CCTCCGCCTA CAGCCTGCGC
ATCGATTTCG AGCGCTTCGC GAAGATCGCC AAGGAAGTCG GCGCGATCTT CTGGGTGGAC
ATCGCCCACT ATGCCGGCCT GGTGGTCGCG GGTGAATATC CCAACCCCGT GCCCTTCGCC
GACGTGGTCA CCTCCACGAC GCACAAGAGC CTGCGCGGCC CGCGCGGCGG CATCATCCTC
ATGAAGGCCG AACACGAGAA GGCGATCAAC TCCGCCATCT TCCCGGGCCT GCAGGGCGGC
CCGCTGGAGC ACGTCATCGC CGCCAAGGCC GTGGCCTTCA AGGAAGCGCT GACGCCGGAA
TTCAAGGCCT ACCAGCAGCA GGTCGCGAAG AACGCCAAGG TGTTCGCCGA AACGCTGATC
GAACGCGGCC TGCGCATCAT CAGCGGCCGC ACGGAGAGCC ACGTCATGCT CGTGGACCTG
CGCGCCAAGG GCATCACCGG CAAGGCGGCC GAAGCGGCCC TGGGCCAGGC CCATATCACC
ATCAACAAGA ACTCCATTCC GAACGATCCG GAAAAGCCGA TGGTGACCAG CGGCATCCGC
GTGGGCACGC CCGCGATCAC GACGCGGGGC TTCAAGGAAG AAGAGACGCG CATCACCGCG
AACCTGCTGG CCGACGTGCT GGAGAACCCG AACGACGAAG CCAACCTGGC CGCGGTGCGC
GAGAAGGTGC ACGCGCTCAC GAGCCGCTTC CCGGTCTATC GCTGA
 
Protein sequence
MYQRNILVEQ ADPEVWAAIQ AENLRQEQHI ELIASENYAS PAVMAAQGSQ LTNKYAEGYP 
GKRYYGGCEN VDVVEQLAID RVKKLFGADA ANVQPNSGSQ ANQAVLLAFL KPGDTILGMS
LAEGGHLTHG MPLNMSGKWF NIVSYGLNEK EEIDYDALEA KAREHKPKLI IAGASAYSLR
IDFERFAKIA KEVGAIFWVD IAHYAGLVVA GEYPNPVPFA DVVTSTTHKS LRGPRGGIIL
MKAEHEKAIN SAIFPGLQGG PLEHVIAAKA VAFKEALTPE FKAYQQQVAK NAKVFAETLI
ERGLRIISGR TESHVMLVDL RAKGITGKAA EAALGQAHIT INKNSIPNDP EKPMVTSGIR
VGTPAITTRG FKEEETRITA NLLADVLENP NDEANLAAVR EKVHALTSRF PVYR