Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2976 |
Symbol | |
ID | 4668808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 3266553 |
End bp | 3269222 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639824176 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_971317 |
Protein GI | 120611639 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.29382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.115477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCC CACCGACCCC GCCCGCCGAG CGCCATGCCG ACATCTTCAT CGGCCAGAGC GAGATGGCAC GGCGCATGCG CCAGCACGAC TGGGAAGCGA CGCCGCTCGG GCCGCCCGAA CGCTGGCCCC AGGGGCTCAA GGCCGCGCTG CGCATCCTGC TGACCTCCCG CTTCGAAATG TGGGTGGGCT GGGGCCCGGA CATCGCTTTC TTCTACAACG ACGCCTACCG CCCCACGCTG GGCACCAAGC ATCCCCAAGC GCTGGGCCGG CCCACTTCGC AGATCTGGGC AGAAATCTGG GACGACGTGA AGGACCGGAT GCACGCGGTG TACCAGCGTG GCGAATCCAC CTGGGATTCC TCCCTGATGC TGCTCATCGA CCGTGCAGGA ACGGGCACCC TCGAGGAGAC CTACCACACC TTCTCGTACA GCCCGCTGCT GGACGACGAC GGGCGCGTGA ACGGCCTGTT CTGCGCGGTG TCCGAAGAGA CGCGCCGCGT CATCAGCGAG CGGCGCCTGG CGGTGCTGCA CGAACTGAGC GCGGCGATGT CGCTGGGCGG CACCCGCCAG CAGGTCGTGG ACGGCGCCTG CGCCACCCTG GCGAACGCGC AGCACGACCT GCCCTTCTCG CTGATCTATC TCCACGATGC CCACGGCACG GCGCGGCTGG CCTGCAATGC CGGCGTGCCC TCGGGCCACC GGCTGGCGCC GCGCGAAATC GCGCCCGGCG CGCCGTGGCC CTGGCGCCTG GACCGGCTCG CGGCCGGCGA GGCCGCATTC GCAGTCCCAC TGGAGCCGGC GGCCGACACG CCCACCGGCG CGTGGCAGGT TCCGCCACAC ACCGCGTTCG TGGTGGCGCT GCCCCCGCAA GGGGACGCCC GGTCCGCGGG CTTCCTCGTG TGCGGTGCGA ATCCGCACCG CCCCGGGGAC GACGCCGAGA CCCGGTCGTT CGTGCAACTG CTCGCCGGGC AGGTGGCGCC GGCCGTCGCG CAGGCCGAGG CGCTGGAATC CCGCACGGCC GAGCGCGACC GCCTGCGCGA ACTGTTCAGC AAGGCGCCGG GCTTCATGTG CGTGCTGCGC GGGCCCGACC ACGTTTTCGA GTTCGTCAAC GATTCATACC AGCAGCTCAT CGGCCGCAGG GACCTCGAAG GCAAGTCCAT CCGCGACGCC ATGCCGGAAC TGCAGGGCCA GGGCATCCAC GAACTGCTCG ACGAGGTGTA CCGCACCGGC AGGCCCTACA TCGGCAAGAA CCTCAAGGTC ATGCTGCAGC GCGATCCCGG CGGTCCGCTG ACCGAGCACT ACCTGAACTT CATCTACCAG CCCACGCTGG ACGGCACGGG GGCGGTGAAC GGCATCTTCG CCGAAGGCTA CGACGTGACC GACCAGCGCG TCGCGGAACA GGAACTGCGC GCCCTCAACA GCCACCTGGA AAGCCGGGTG GCCGAGCGCA CCCGCGACCT GGAGGACGCT CTGGCGCGCC TCACCGCGGA ATCCCGCGAG CGCGAGGCCG CCCAGGAGGC GCTGCGGCAG TCGCAGAAGA TGGAAGCCGT AGGCCAGCTC ACCGGCGGTC TCGCGCATGA TTTCAACAAT CTGCTGGCCA CCATCAGCGG CAGCCTCGAG TTGCTCAACC GGCGCGTGGC ACAGGGGCGC TTCGACGACC TCGCCCGCTA CGTGGCGGTC GGCCAGGGGG CCGCGCGGCG CGCCGCCTCC CTCACCCACC GCATGCTGGC CTTCTCGCGG CGGCAGACGC TCGACCCCAA GCCCACCGAT GTGAACCGTC TGGTGCGCGG CATGGAGGAG CTCATCCGGC GCACCATCGG CCCCGAGACC GAACTGGAGG TCGTGAACGC GGTGGGCCTG TGGACCACCC ATGTGGACCC CCACCAGCTC GAAAGCGCTC TCCTGAACCT GTGCATCAAT TCCCGCGATG CCATGCCCGG CGGCGGCCGG CTCACCATAG AGACCGCCAA TGCCTGGATG GACGAGCGCG CCGGACGCGA GCGCGACCTT CCGCCGGGCC AGTACGTGTC GCTGTGCGTG ACCGATACCG GCACGGGCAT GGCACCCGAG GTGATGCGCC GGATCTTCGA GCCCTTCTTC ACCACCAAGC CGATCGGCAT GGGCACGGGC CTGGGCCTTT CGATGGTGTA CGGGTTCGCC CGGCAATCCG GCGGGCAGGT GCGCGCTTAT TCCGAGCCCG GCATGGGCAC GACGATGTGC ATCTACCTGC CCCGCCACGA AGCGCCGCCC GAGGATTCCG ACCTGCCGGC CCTGCAGCCC GCGGAGGCCG GCGAGGGATC GGGCACGGTG CTCGTGGTGG ACGACGAGCC CAGCGTGCGC GCCCTGGTGG TGGAGGTGCT GCACGAAATG GGCTACCAGA CCATCGAGGC GCACGACGGC CCCTCCGCAC TGCAGGTGCT GCAATCGCGC ACCCACCTGG ATCTGCTGAT CACCGACGTC GGCCTGCCCG GCGGCATGAA CGGGCGCCAG CTCGCCGATG GCGGGCGCCT CACGCGGCCC GACCTGCAGA TCCTCTTCAT CACCGGCTAT GCCGAGAACG CGGCCGTGGG CAACGGCCAT CTGGAGCGGG GCATGCACGT GCTGACCAAG CCCTTCACGC TCGATGCGCT GGCCCACCGC GTGCGCACCC TCATCCCGCA ACCGTCATGA
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Protein sequence | MTIPPTPPAE RHADIFIGQS EMARRMRQHD WEATPLGPPE RWPQGLKAAL RILLTSRFEM WVGWGPDIAF FYNDAYRPTL GTKHPQALGR PTSQIWAEIW DDVKDRMHAV YQRGESTWDS SLMLLIDRAG TGTLEETYHT FSYSPLLDDD GRVNGLFCAV SEETRRVISE RRLAVLHELS AAMSLGGTRQ QVVDGACATL ANAQHDLPFS LIYLHDAHGT ARLACNAGVP SGHRLAPREI APGAPWPWRL DRLAAGEAAF AVPLEPAADT PTGAWQVPPH TAFVVALPPQ GDARSAGFLV CGANPHRPGD DAETRSFVQL LAGQVAPAVA QAEALESRTA ERDRLRELFS KAPGFMCVLR GPDHVFEFVN DSYQQLIGRR DLEGKSIRDA MPELQGQGIH ELLDEVYRTG RPYIGKNLKV MLQRDPGGPL TEHYLNFIYQ PTLDGTGAVN GIFAEGYDVT DQRVAEQELR ALNSHLESRV AERTRDLEDA LARLTAESRE REAAQEALRQ SQKMEAVGQL TGGLAHDFNN LLATISGSLE LLNRRVAQGR FDDLARYVAV GQGAARRAAS LTHRMLAFSR RQTLDPKPTD VNRLVRGMEE LIRRTIGPET ELEVVNAVGL WTTHVDPHQL ESALLNLCIN SRDAMPGGGR LTIETANAWM DERAGRERDL PPGQYVSLCV TDTGTGMAPE VMRRIFEPFF TTKPIGMGTG LGLSMVYGFA RQSGGQVRAY SEPGMGTTMC IYLPRHEAPP EDSDLPALQP AEAGEGSGTV LVVDDEPSVR ALVVEVLHEM GYQTIEAHDG PSALQVLQSR THLDLLITDV GLPGGMNGRQ LADGGRLTRP DLQILFITGY AENAAVGNGH LERGMHVLTK PFTLDALAHR VRTLIPQPS
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