Gene Aave_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2858 
Symbol 
ID4669494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3148863 
End bp3149384 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID639824058 
Producttranslation initiation factor 3 
Protein accessionYP_971200 
Protein GI120611522 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.357759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCG AGGTTCGCCT CTCCGGGCCG GACAACGAGC CGCTCGGGGT GGTCAGCCTC 
ATGGAAGCCC TCCGCATGGC GGGCGAGCTG GATGTGGACC TGGTGGAGAT TGCCGCTACG
GCCAACCCTC CCGTGTGCCG CCTTGTGGAC TATGGAAAGT TCAAGTACCA AGAGCAGAAG
CGCGCGGCCG AGGCCAAGGC CAAGCAGACG GTCATCGAAA TCAAGGAAGT GAAGTTCCGT
CCCGGTACGG ACGACGGCGA CTACAACATC AAGCTGCGCA ACATCCGCCG TTTCCTCGCC
GAAGGCGACA AGTGCAAGAT CACGCTGCGC TTCCGCGGGC GTGAAATCAC CCACCAGGAA
ATCGGCCTCG CGCTGCTCAA CCGCATCCGC GACGACCTCG GTGACACCAT CGTGGTCGAG
CAGTTCCCGA AGCTCGAAGG GCGCCAGATG ATCATGATGA TCGCGCCCGG CAAGCGCAAG
CCCGCCGCGA AGGCGGTGGC GGAAGGGGCG CCGGCCACCT GA
 
Protein sequence
MAPEVRLSGP DNEPLGVVSL MEALRMAGEL DVDLVEIAAT ANPPVCRLVD YGKFKYQEQK 
RAAEAKAKQT VIEIKEVKFR PGTDDGDYNI KLRNIRRFLA EGDKCKITLR FRGREITHQE
IGLALLNRIR DDLGDTIVVE QFPKLEGRQM IMMIAPGKRK PAAKAVAEGA PAT