Gene Aave_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2841 
Symbol 
ID4667429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3125701 
End bp3127899 
Gene Length2199 bp 
Protein Length732 aa 
Translation table11 
GC content70% 
IMG OID639824040 
ProductDNA ligase, NAD-dependent 
Protein accessionYP_971183 
Protein GI120611505 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID[TIGR00575] DNA ligase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC ATCCCGACCT GTTTTCCGCC CCTGCCCAGG AGGCCCCTGA AGACCTGGGC 
CTGCGCGCCG CCGCGCTGCG GGCGCAGTTG CACCAATGGG CACACCAGTA CTACGTGCTG
GACGCACCCA CCGTGCCGGA TGCCGAATAC GACCGCGTCT TCCAGGCCCT GCAGGCACTG
GAGACGGCGC ACCCCGAGCT CGTGACACCC GATTCGCCCA CGCAGCGCGT GATCGGCGCG
GTGATGGAGG GCCTGACGCC CGTTCGCCAC ACGGTGCCGA TGCTCAGCAT CCGCACCGAG
ACCGACACCG AGGCCAGCGG CGCCGAGACG TTCGATGCCC GCGTCCGCCG GGAGCTCAAG
CTCGCGCCCG ACGCACCGCC GGTCGAATAC GTCGCCGAGC CCAAATTCGA CGGCCTGGCC
ATGAGCCTGC GCTATGAGAA CGGTCGCCTG GTACAGGCCG CCACGCGCGG CGACGGCGAG
GTGGGCGAGG ACGTGACCCA CAACATCCGT ACCATCCGCC AGATTCCCCT CACGCTGCCC
ACGGGCGGCC GCTATGGCGT GCCGCCCGTA CTGGAGGTGC GGGGCGAGGT CTACATGCGC
CGGGCGGATT TCGACCGGCT CAACGAGCGC CAGCGCGAGG CCGGCGGCAA GACCTTCGTC
AACCCGCGCA ATGCGGCGGC CGGCGCGGTG CGCCAGCTCG ACTCGGGCAT TGCCGCGCAG
CGGCCCCTGA GCTTCTTCGC CTATGGCCTG GGCGACATCA CTCCGGCAGC AGAAGGCGGC
CCCGACTTCG CGACCCATTT CGACATGCTG CGGCAGCTCA AGGCCTGGGG CTTCCCGGTC
GCCGCGCAGG TGCGGACCGC GCGGGGCGCG TCCGAGCTGG TCGCTTTCCA CCAGGAGGTG
GGCGCGAGCC GCGACCAGTT GCCCTACGAC ATCGACGGGG TGGTGTACAA GGTCAACAGC
CTGGCGCTGC AGCGCCAGCT GGGATTCGTG ACCCGCGAGC CGCGGTGGGC CGTGGCGCAC
AAGTACCCGG CGCAGGAGAT GGTCACCCGC GTGGAGGGTA TCGACGTACA GGTGGGCCGC
ACCGGCAAGC TCACCCCCGT GGCGCGGCTG GCTCCCGTCT TCGTCGGTGG CGTCACCGTC
ACCAACGCCA CGCTGCACAA CCTGTTCGAG ATCCGAAAGA AGGGCGTGCG CGTGGGCGAC
CAGGTCATCG TGCGCCGCGC GGGCGACGTG ATCCCCGAAG TGGTGGGCAC GGTTCCTGCG
GCCCTGCTGC CCGTGGCGGG CGCGCTGCAG GGCTCCGATG CCCTGGCGGA CGCCGCTTCC
GGGGCCGACG GCACGGCGCC GGGCGCCGAC GCGGCGCGTG CCGCGCCGCG GTCGCCCTAC
GTGCCGAACT TCCGCATGCC GCGCCAGTGC CCCATCTGCG GCAGTACGGT GGTCCGGGAA
AAAGGCGAAG CCAACCATCG CTGCACGGGG GGGCTCTTCT GCCCGGCCCA GCGCAAGGAG
GCGCTGCTGC ACTTCGCCCA GCGCCGGGCC ATGGACATCG AAGGCCTGGG CGAAAAGCTG
GTGGACCAGC TGGTGGAGGG CCAGGTCATC CGTACCCTGC CGGACCTCTA CCGCCTGGGC
CTGACGGCGC TCAGCAGCCT GGACCGCATG GCGGAGAAAT CCGCGCAGAA CGTGCTGGCG
GCCCTGGAAA AGTCCAAGCA CACCACGCTG CCGCGCTTCC TGTTCGGCCT GGGCATCCGC
CATGTAGGCG AAGCCACGGC CAAGGACCTG GCCCGCCATT TCGGCGGCCT CGATGCCATC
ATGGACGCCA GCGTGGAGCA ACTGCTGGAG GTGAACGACG TCGGCCCCGT CGTGGCGGAG
GCCATCCACA CGTTCTTCGC GCAGCCCCAC AACCGCGAGG TGGTCGAGCA GCTGCGGGCC
TGCGGCGTCA CCTGGAAGGA AGGCCCGCCT GCAGAACGCG CCACCTTGCC GCTGGCCGGG
AAAACCTTTG TTCTCACCGG CACGCTGCCG ACTCTGAGCC GTGAAGACGC CAAGGACCGG
CTCGAAGCCG CGGGCGCGAA GGTCGCAGGC TCCGTCAGCA GGAAAACGCA CTACGTCGTG
GCAGGCGAGG AGGCCGGCAG CAAGCTGGCC AAGGCACAGG AGCTGGGCGT GCCGGTACTG
GACGAGGCGG GCATGCTCGC CCTCCTGCAG GGCCGCTGA
 
Protein sequence
MAEHPDLFSA PAQEAPEDLG LRAAALRAQL HQWAHQYYVL DAPTVPDAEY DRVFQALQAL 
ETAHPELVTP DSPTQRVIGA VMEGLTPVRH TVPMLSIRTE TDTEASGAET FDARVRRELK
LAPDAPPVEY VAEPKFDGLA MSLRYENGRL VQAATRGDGE VGEDVTHNIR TIRQIPLTLP
TGGRYGVPPV LEVRGEVYMR RADFDRLNER QREAGGKTFV NPRNAAAGAV RQLDSGIAAQ
RPLSFFAYGL GDITPAAEGG PDFATHFDML RQLKAWGFPV AAQVRTARGA SELVAFHQEV
GASRDQLPYD IDGVVYKVNS LALQRQLGFV TREPRWAVAH KYPAQEMVTR VEGIDVQVGR
TGKLTPVARL APVFVGGVTV TNATLHNLFE IRKKGVRVGD QVIVRRAGDV IPEVVGTVPA
ALLPVAGALQ GSDALADAAS GADGTAPGAD AARAAPRSPY VPNFRMPRQC PICGSTVVRE
KGEANHRCTG GLFCPAQRKE ALLHFAQRRA MDIEGLGEKL VDQLVEGQVI RTLPDLYRLG
LTALSSLDRM AEKSAQNVLA ALEKSKHTTL PRFLFGLGIR HVGEATAKDL ARHFGGLDAI
MDASVEQLLE VNDVGPVVAE AIHTFFAQPH NREVVEQLRA CGVTWKEGPP AERATLPLAG
KTFVLTGTLP TLSREDAKDR LEAAGAKVAG SVSRKTHYVV AGEEAGSKLA KAQELGVPVL
DEAGMLALLQ GR