Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2838 |
Symbol | |
ID | 4665106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3117392 |
End bp | 3122356 |
Gene Length | 4965 bp |
Protein Length | 1654 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639824037 |
Product | YD repeat-containing protein |
Protein accession | YP_971180 |
Protein GI | 120611502 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG3209] Rhs family protein [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0573188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGG CACGGCAGGC GGACGAGATA GGTCACGTGT CGGTGTGGGC GAGGCTGGCG CGGGTGGGAT TGCGGCTGGC GTCGGGGATG GTGGAGACGC TGCTGGTGGC GGGGGTGGTG GCGCTGGCGG CGGGGGTGTC GGTGGCGACG ATGGGGTGCG GGGCGATCCT CGCGTGCGGG CTGCTGGCGG GGTTCATCGG GGGGGCGACG GGCTGGAGCG ACTACAAGGA AAAAAAGATC CAGGAGATGA CCGAGGACAT CGGGGACCTG GACATCACGG GCACGCTGGG CATCCGCGGG GCGGCGACCG TGCGCATCAA CGGCCGCGCG GCGATGCGGG CGGTGGCGGA CGCGGCCGTG TGCCGCGACC ATGGGCAGCC CAACCCGAAC TTCATCGCCG AGGGCTCGGA CTCGGTCTTC ATCGAGACCT ACCCTGCGGC GCGCAAGGGC GACAAGATGA TGTGCGCCGC GCAGATCGCC AGCGGCTCGG ACGACGTGCT GGTGGGGGGC AACAAGACGG CGTACCTGGA GATCGCCGAC GACCGGGCGT GGTGGGAAAC GGCGCTGGAG ATCGGGGTGG GCCTGGCGAT GGGCCGGGGC AACTTCCTGG GCAAGGTGGG GTGCCTGGCG CTGGGGGCGG TGATGGGCAT GGCGGGCGAC GCGCTGGGCC GGGGATTCCG GGCGCTGATC GGCTACCCGG TGCACCCGGC CACGGGCGGC AAGGTGCTGG ACGGCAGCCA GGACACGGAC TTCGTGCTGC CCGGGCCGCT GGGCATTGCC TGGCGGCGCT TCTACAGCAG CCATGACCAC CGGGGCGGCA CCCTGCACGG CGCGGGCTGG AGCGTGCCCT ACGAGATCGA GCTGCACGTG GAGCGGCTGG CGGCCGGTGC GCCGCCTTCG CGCATCACCT ACGTCAACCC GCAAGGCCGG CACATCGAGC TGCCGGCAGT GGCCCCGGGC ACGGCGCTCT TCAACGTCGG CGAGGGCTTC ACCCTGGGCT GCACGGCGGG CGGGCACTAC GAGGTGGGCG AGCTCGACCA CGTCGCCTGG CAGTTCGGCC CGGCGCCGCA GGAGGCGGGC ACGCACGTGC TGAAACTGCT GCGCATCCGC GACCGGTTCG GGCACTGGGT GGGGCTGCGC TACGACGGCG AGCGGCGCCT GGCGGGCATC GCGGACCACC TGGGGCGGCT GCTGCGGCTG GATTACCAGG CAGGAACTCG CCTGGTCGCC GCGATCCACC TCGTGCAGGC GGCGCCGGGC GAGCAGCTGG GCCTGCTGGC GACCTACCGC TACGACGCGG GCGGCCAGCT CGCCGACGTG CAGGACCGCA CGCGCGCGAC CGTGCGGCGC TTCGCGTATT CCGAGGGCCT GATGGTGCGC CAGGAGGACG CGGCCGGCTT CGCGTGCCAC TACGCCTGGG AGGATGCGGC GCAGGCCAGC GGCCCCGAGC GGCAGGATGG TGCCCGGGGA CCCGATGGCC GGCACCTGCG CGACCGCCGG GTGGTGCGGC ACTGGACGGA GGACGGCGAG AGCTACGCCA TTGCCTATGG CGTGGACGGC AGCTTCGATG GCGGCCCCGC CGGCGAGACC GGCGGCTGGA CACGGTCAAC CGACCAGCTC GGGCGCGAGG AGCGCTGGCA GTGGGACCGC TGGCACAACC TCACGGCCTA CACCAACGCG GTGGGCGCCA CGTGGCGGCT CGCGTGGAAC GAGCGGCGCG AGCTGCTGTC GTGCACGCGG CCCTCGGGGG CGACCACCAC CTTCCAGTAC GATGACAACG GCATGCAGAC GGGCGTGGTG GACCCGCTGG GGCGGCTCAC GCGCACGCTC TGGGACAGCC AGTGGTTCGA GCCGCTGCGC ACCACGGGCC CTGACGGGGC CACGTGGCGC TACGAATACG ACCGCCAGGG CCTGCTGGTG CAGGAGACGG CGCCCGATGG CGGGGTGACG CGCTACGCCT ACGACGCGCA GGGCCAGGTG GTGCAGATCC AGGACGCGCT GGGCGGGGCC AGGACCCTGC AATGGAACGA GCGGGGCCTG CTGGTGCGCC ATACCGACTG CTCGGGGCGC ACGACGCGCT ACGGCTGGGA CGGCTGGGGC CAGCTGCAAT CGGTGACCGA TGCGCTGGGC CAGCAGACGC AGGGCGTGGT GGACGCGCGC GGGCAGCTGC GCTCGCTGAG GCTGCCCGAC GGCAGCAGCC AGGGATTCGA ATACGACGCG GGCGGGCGGC TGGTGGAGCA CACGGACGCG CTCTCGCGGG CCACGCGCTA CGGGCACAAC GTGCGCGGGC AGCTGCTGTG GCGGCGCGAC GCGCAGGGAC GGGAGATCGG GGCGGCGCAC GATGGGGCGC ACCGGCTCTC GGCGCTCGCC ACGGAAAACG GCGGCGTCTA TCGGTTCCGC TACGACGACG CGGACCGGAT GGTGGAGGAA GAGCGCCTGG AGGGCACGCG GGTGGGGCTG GAATACGACG CGGACGGGCA CGTGGTGGCG GTGGTGCACC ACCCGGCGCG GGGCGAGGAT GTGTTCCACG AACTGGAGAC CCAGGCGCAG GAAGGCACGC TGCGGGAAGG CCCGGCGGGC CAGAACGCTC AGGCGCCCAG GCGCACGGAT CTGCAGCGCG ACGCGCTGGG GCGGCTGGTG GAAAAGCGGG TGGGCGGCAG CGTGCTGCGC TACCGCTACG ACGCGGGCGG GCGGCTGGTG GAGGCATCGC GCTGGCGGCG CCAGGCCGGA GCGCAAGCCG AATCCAAAGC CGACACTGAA GCCGAGACCC TGGAGCTGCA GCACACGACA CGCTTCGAAT ACGACGCGCT GGGCCGCATC GTGGCCGAGC ACGCTCAGGA TGCAGCCAGC GGCCAGGTGC ACACGCTGCG GCATGAACAC GACGCGCTGG GCAACCGCAC GCGCACGCAG CTGCCGGCGG TCAACAGCCG TGCGGGCCGG GCCGTGCTGC GGCGCAGCCT GAACTACCTG CACTACGGCT CGGGGCACCT GCACCAGATC AACCTGGGGC TGGCCGAGGA ACTGGCGCAG GAAGCACCCC AGGAGTCGCT GCCGGGTGAA ACGCTGCAGG CCAGTGGCCT GGACAACGTG CTGCCCGAAC CGGTACGCGA AGTGCACCGG CTCATCGCCG ACATCGAGCG CGACGCACTG CACCGGGAGG TGCTGCGCAC ACAGGGCACC TTGGCCACGC GCTACGCGCT GGACGCGCTG GGACGGCGCA CGGGCAGCTG GACGCGCTCC GGGCTGGGCC TGCAGGACGC GGCGGGCGAG GACTGGCGCG CGGCATGGCA GCAGCAGGTG GAGGCGCTGG CCCAGCGCGG CCCCTCGGCG GCCGTGGGGC TGCTCAAGCA GTACCGCTAC GACGCGGTGG GCGAGCTGCG CGAGAGCGTG CACAGCCACA AGGGGCGCAC GAGCTGGCGC TACGACGCCA CGGGGCGGGT GGAGCAGGTG CTGCGCGCGG GCCCCGGGGC GCAGCCGGGC GGGGGCGTGC AGGGCCGCTC GGAAGAAGTG TTCCGCTACG ACCCGGCCGG CAACCTGCTG GATGCGAGCC TGGCGTCGCG CATGGCGGCC AACGACGGGG GCCCTGGCGG CGCCGGTAGC CCCGGCACGG GCTCCACGGG CTACCTGCGC GACAACCTGG TGCGGGTGTA CGAGGACAAG CGCTTCGCCT ACGACGGCTT CGCGCGGCTG CGCGAGAAGC GCATCGGGCG GCACACGGTG CAGCGCTTCG AGTGGGACGA CGAAGACCAG CTGGTGGCGG TGGAGACCAC GCGCCACCCG GGCACGGCCC AGGCCACGCG CCAGCGGGTG GAGTTCCGCT ACGACGCGCT GGGCCGGCGC ATCGCCAAGC AGGACGCGTT CGGGCGCACG GAGTTCATCT GGGAGGGCAT GCGGCTGATC GAGGAGCGGC GCGGCTCCAA GGTGGTGAGC TACGTGTACG AGCCGGGCAG CTACGTGCCG CTGGCGCGCA TCGATGCGGA CGGGCAGCGG CTGGAAGGCA GCGGGCATGG CGGACTCGTG GGCGGTGCAG GATCGGATGC CGCAGGCCGG GCAACCTCAG CCAACCCAGG CACTGGCTAC GCCTCGCTGA ACCCGATGGC CGCGCCCGGC AGCAGCGCGG CAGGGCAGGC TGCTTCTGCG TCAGCCCAGA CCCCGGCCGA ATCGCGCCTG CGCGCCAGCG CCCAGGTGAG CTACTTCCAC AACGACCCCT CGGGCCTGCC GGAAGAGGTG ACCGACGAGG CCGGCGAGGT GCGCTGGCGC GCGAGCTGGC GCACCTGGGG CAGCGCGCTG GAGGAGCGCT GGGAGGCCGT GCGCATCGAC GGCAGCGCCA TTCCCGCGGT GCAGCAGCGG CACAGGAACG AGGACACGCT GGAGCAGAAC CTGCGCCTGC AGGGCCAGTA CCTGGACCGC GAGACGGGGC TGCACTACAA CACCTTCCGG TACTACGACC CGGATGTGGG GCGGTTCATC AGTCCGGATC CGATCGGGTT GGCGGGTGGA CTCAACCTGC AGCGGTATGC AGCCAACCCC ATATCGTGGA TCGATCCGCT GGGTCACGAA AATTATGTGA TTATTGGAGA AGGGCAGGAT GCCGTAAATA GATATGCGAA AATCATGTCG GACAACCCAA AACTCAAGGG TCATGAATTC AGAACGATTC AAGATGACTG GAAGCCGATG ATGAGAAAGT CTGGAGCAAG CCGTTTGGAG TTCGGCAGCG CGGAATGGGA GCGCAAGGCA ATTCAGGCGA ATGTTGACTG GATCAAGGAC AGACATGCCG AAGGGTATAA ATTCATCGAC ATTGGCGAAG ACGGCTCTCC AAACAGAAGT TCTTTCTACA AGGCAGAGAA GGACGCGCTC TCTGCGCTGG GTGTAAAGCC CATGAAGGGG AACTCCACTC ACATCGCAGC AGCCCGGGCA GCTGCGAAAC CCAGTGGAAG ACCGCCGTCA AAAACAGGAT GCTGA
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Protein sequence | MAAARQADEI GHVSVWARLA RVGLRLASGM VETLLVAGVV ALAAGVSVAT MGCGAILACG LLAGFIGGAT GWSDYKEKKI QEMTEDIGDL DITGTLGIRG AATVRINGRA AMRAVADAAV CRDHGQPNPN FIAEGSDSVF IETYPAARKG DKMMCAAQIA SGSDDVLVGG NKTAYLEIAD DRAWWETALE IGVGLAMGRG NFLGKVGCLA LGAVMGMAGD ALGRGFRALI GYPVHPATGG KVLDGSQDTD FVLPGPLGIA WRRFYSSHDH RGGTLHGAGW SVPYEIELHV ERLAAGAPPS RITYVNPQGR HIELPAVAPG TALFNVGEGF TLGCTAGGHY EVGELDHVAW QFGPAPQEAG THVLKLLRIR DRFGHWVGLR YDGERRLAGI ADHLGRLLRL DYQAGTRLVA AIHLVQAAPG EQLGLLATYR YDAGGQLADV QDRTRATVRR FAYSEGLMVR QEDAAGFACH YAWEDAAQAS GPERQDGARG PDGRHLRDRR VVRHWTEDGE SYAIAYGVDG SFDGGPAGET GGWTRSTDQL GREERWQWDR WHNLTAYTNA VGATWRLAWN ERRELLSCTR PSGATTTFQY DDNGMQTGVV DPLGRLTRTL WDSQWFEPLR TTGPDGATWR YEYDRQGLLV QETAPDGGVT RYAYDAQGQV VQIQDALGGA RTLQWNERGL LVRHTDCSGR TTRYGWDGWG QLQSVTDALG QQTQGVVDAR GQLRSLRLPD GSSQGFEYDA GGRLVEHTDA LSRATRYGHN VRGQLLWRRD AQGREIGAAH DGAHRLSALA TENGGVYRFR YDDADRMVEE ERLEGTRVGL EYDADGHVVA VVHHPARGED VFHELETQAQ EGTLREGPAG QNAQAPRRTD LQRDALGRLV EKRVGGSVLR YRYDAGGRLV EASRWRRQAG AQAESKADTE AETLELQHTT RFEYDALGRI VAEHAQDAAS GQVHTLRHEH DALGNRTRTQ LPAVNSRAGR AVLRRSLNYL HYGSGHLHQI NLGLAEELAQ EAPQESLPGE TLQASGLDNV LPEPVREVHR LIADIERDAL HREVLRTQGT LATRYALDAL GRRTGSWTRS GLGLQDAAGE DWRAAWQQQV EALAQRGPSA AVGLLKQYRY DAVGELRESV HSHKGRTSWR YDATGRVEQV LRAGPGAQPG GGVQGRSEEV FRYDPAGNLL DASLASRMAA NDGGPGGAGS PGTGSTGYLR DNLVRVYEDK RFAYDGFARL REKRIGRHTV QRFEWDDEDQ LVAVETTRHP GTAQATRQRV EFRYDALGRR IAKQDAFGRT EFIWEGMRLI EERRGSKVVS YVYEPGSYVP LARIDADGQR LEGSGHGGLV GGAGSDAAGR ATSANPGTGY ASLNPMAAPG SSAAGQAASA SAQTPAESRL RASAQVSYFH NDPSGLPEEV TDEAGEVRWR ASWRTWGSAL EERWEAVRID GSAIPAVQQR HRNEDTLEQN LRLQGQYLDR ETGLHYNTFR YYDPDVGRFI SPDPIGLAGG LNLQRYAANP ISWIDPLGHE NYVIIGEGQD AVNRYAKIMS DNPKLKGHEF RTIQDDWKPM MRKSGASRLE FGSAEWERKA IQANVDWIKD RHAEGYKFID IGEDGSPNRS SFYKAEKDAL SALGVKPMKG NSTHIAAARA AAKPSGRPPS KTGC
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