Gene Aave_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2800 
Symbol 
ID4668119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3073072 
End bp3073605 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content73% 
IMG OID639823999 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_971142 
Protein GI120611464 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.705658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.415796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCA GTTCCTCCGA CGACGACAGC CAGCAACGCT TCGCCCTCGG CTTCCTGTTC 
GCGATCATCG CGGTCGTGGT GTCCGCCGTG GTGGGCACCG TGGTGGTCCA GCGCGGCATC
GCGCGCCCGG CGGCGGACCC TGCACCTGCA GCGGAAGTGG TGGCTCCCGC CGGCACGCTC
GACATCGCCG GCAACGAGGT CGCGCGCGTG GTGGTGGACG GCAGCGTGGT GAAGTTCTAC
TTCGCATCCG GCCGCGCCGA CCTCACGGCC GATGCCGCTC CGGCCATCGC CGACGTGGTG
CGCGCGGTGA AGGACGGCAA CCGCCGCGTG GTGATCTCGG GCTTCCACGA CGCCACGGGC
GACGCCGCTG CCAACGCAGG GCTGGCCAAG CAGCGCGCCC AGGCCGTGCG CGATGCGCTG
GTGGCTGCCG GCGCACCCGA GGACCGCATC GAGCTGCGCA AGCCCGAACT CGCCCAGGGC
GACGGCAATG CCGCCGAAGC CCGCCGCGTG GAAGTGACGC TGGCCGCGGC CTGA
 
Protein sequence
MAFSSSDDDS QQRFALGFLF AIIAVVVSAV VGTVVVQRGI ARPAADPAPA AEVVAPAGTL 
DIAGNEVARV VVDGSVVKFY FASGRADLTA DAAPAIADVV RAVKDGNRRV VISGFHDATG
DAAANAGLAK QRAQAVRDAL VAAGAPEDRI ELRKPELAQG DGNAAEARRV EVTLAAA