Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_2789 |
Symbol | |
ID | 4668857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3062194 |
End bp | 3062997 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639823988 |
Product | ABC-2 type transporter |
Protein accession | YP_971131 |
Protein GI | 120611453 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCC TGCAGGCATC GCTGATGCGC ATCGCTGCCA TCAGCGTGCG CCACCTGGTG GTGCTGCTGC GGTCCTGGCC ACGATTGGTG GAGTCCGTGT ACATGCCTAC CGCCACGCTG ATGCAGTGGG TCATCTTCAA GAACTACCTC AGCGCCCAGT CCCTGCCCAC GTTGGGAAGC ACTTTGCTCG TTTCCTACCT CATGTGGGAA ATCATCTTCA GGTTCAAGCA GGGCACTGTC ATGTCGTTGT TCACGGAGAT GTGGGGCCGC GCTCTGCCGC AGCTCTTCAC AACGCCCCTG ACGCCGCTGG AAATGATGTT CGGATGTTTC ATCGTGGGAC TCGTGCGCGC GGTGCTCGGA ATCGGCATTG CCGTGGCCGT CGCCCTGGGA GCAGGCTGGT CGGACTACAT CGACCTGCGC GGCTCCGTGC TGGTGGTGAC CGTATTCGCG TTGATGTCCT CGGCAGCCGT CTCCCTGATC ATGTCCGGCG TCATCCTGCG CTGGGGCATC GCCGCAGAGA TCCTTTCGTG GGCGCTGGTA CTGACGCTTG CCCCGCTGTC CGGCGTCCTG TATCCCACCT CCGCGCTTCC CCTTGGGCTG CAATGGGTGT CCGCACTGCT GCCGACGACC TACGTTTTCG ACTGCGTCAG AGAGCTGCTC GCCACGGGGT CCATCATGGG CGGCACCCTG TCCTTGGTCG CTGCCACCGC CAGTGCCTGG CTTGCCATCG GCCTGGCGCT CTTTCTCATG ATGTTCGAGA ACACCCGAAA AAGCGGATTG CTGGACGGAG GCCCCGTTGA CTAG
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Protein sequence | MRPLQASLMR IAAISVRHLV VLLRSWPRLV ESVYMPTATL MQWVIFKNYL SAQSLPTLGS TLLVSYLMWE IIFRFKQGTV MSLFTEMWGR ALPQLFTTPL TPLEMMFGCF IVGLVRAVLG IGIAVAVALG AGWSDYIDLR GSVLVVTVFA LMSSAAVSLI MSGVILRWGI AAEILSWALV LTLAPLSGVL YPTSALPLGL QWVSALLPTT YVFDCVRELL ATGSIMGGTL SLVAATASAW LAIGLALFLM MFENTRKSGL LDGGPVD
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