| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2735 |
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| Symbol | |
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| ID | 4665585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3004161 |
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| End bp | 3006527 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639823934 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_971077 |
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| Protein GI | 120611399 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0298298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGG ATGGCGCTCG CCGATGCAAA ATGACACGCC GCGTCACCAT CCAGACGCCC
CTGGGAGAGC AGCTGCAGTT CCGGCAGTTG CGGGGCAGCG AGGAGCTGAG CCAGCTTTTC
TCCTTCGATA TCGACCTGCT CTCGGAGGGG CGCGAAATCG ATCCCAAGAC GCTGTTGGGC
AAGACGGCGA CGGTGGAGAT CGAGACCGAA GGCGGGGGCA AGCGCTACCT GGACGGCCTG
GTCACGCGCT TCGGCATGCA GGGCCAGGAC CATCGGCTGT ACTCCTACCA CCTGCGCCTG
CAACCCTGGC TGTGGGTGGC CACGCGGCGG CAGGACTTCC GCATCTTCCA GTTCAAGACC
GTCCCGCAGA TCGTCCAGGA AGTGCTGGGC CGCTACGGTT ACCCGATGCA ATTGAAGCTC
ACGCGCGCCT ACCGCGCCTG GGACTACTGC GTGCAGTACG GCGAGAGCGA CTTCGACTTC
GTATCGCGCC TGCTCGAGCA TGAAGGCGCG TATTACTACT TCCAGCACGC GAGCGGCCAG
CACACCCTGG TGATCGCCGA CGACATCGTG GCCGGCCACG AGCCCTTGCC GGGCGCGGCC
GTGATCCCGT TCTACCCACC CGAGAAATCG GCCACCGCCG ACCGCGAGAA CATCCACGCC
TGGAGTCTGG GCGAAGAAAT CAAGCCCGGC AGGTACTACA ACGACGACTA CGACTTCAAG
AAGCCGAGGT CGGACCTCTC CAACATGCGC CAGCAGCCCC CGGGCCATGC GCACGATGCC
TACGAGATCT ACGAATGGCC GGGCGGCTAC GTGCAGCACG GCGACGGCGA GCAGTACGCC
CGCGTGCGCC TGCAGGAAGG CCTGACGGGC CACAGCACCG TCCGGGGCGA ATCCCGCCAT
CGCAGCCTGG CGCCGGGCTA CACCTTCACG CTGGAGAACT ACCCGCGCGG TGACCAGAAC
CGGCAGTACC TCATCACGGG CGTCACCTAC CACCTGCACG AGAACCCGCG CAGCTCATCG
TTCAACAGCG CCAAGCCGGG CGAGGCGCTC AAGCACAACG AAGAGCAGGG CTCGTTCCAG
AAATTCAGCC TCACGGCCCA ACCCACGAGC CTGCCTTACA CCCCCGCCAG AAAGACGCCC
AAGCCCAGAA CCACCGGCCC GCAGACCGCC GTCGTGGTCG GCCCGGCCGG CGAAGAAATC
TGGACGGACG AATACGGCCG CATCAAGGTG CAGTTCCACT GGGACCGGCT GGGGGCGATG
GACGAGAACT CCATCTGCTG GATGCGGGTG GCCACGAGCT GGGCGGGCTC GGGCTTCGGG
GCGATCTCGA TCCCGCGCAT TGGGCACGAA GTGGTGGTCG ACTTCCTCAA CGGCGATCCG
GACTACCCGC TGGTCGTGGG CTGCGTCTAC AACGCCGCCA ACATGCCGCC CTGGGCCTTG
CCGGGCAATG CCACGCAGTC GGGCATCAAG ACCAAGTCCA GCAAGGGCGG GGCCTTCGGC
GACGGGATGA AGAACGGCGC GGGCGATGCC AACGCGATCC GCTTCGAGGA CAAGAAGGGC
GCAGAGCAAT TATGGCTGCA TGCGCAGAAG GATCAGCTCA CCGAGGTCGA GAACGACGAG
GACAAGTGGG TGGGCCAGGA CCGGCGAAAG ACGATCGACC GGGACGAAAC CACCATCGTG
CATCGGGACC GGACAGAAAC CGTGGACCGC GACGAGAAGA TCACGGTGCA CAACAACCGC
ACCGAGCGGG TAGACCACGA CGAGACGATC AGCATCGGCG ACAACCGCCG GGAAGACGTC
GGCATCGACG AGACGGTCTC CATCGGGAAG AACCGCACGA AGACCATCGG CCGCAACGAG
AAGGACAAGA TCGGCAACAA CTGGTCGATC AAGGTCGGCA AGATGAAGAC CGAGACCATC
GGCATAGCCT ACATGCAGAA CGTGGGCGTG GGCCGGATGG AGAACGTGGG CGTGGCCTAC
AACCTCAACG TGGGCGCCGT CATGGCCACC GTGGTCGGCA GTACGCAGAC CACAATGGTT
GGCAGCGACC GCAGCGTGAA GGTCGGCTCC AACCAGAACA CGGACGTGGG TACCAAGTAC
ACGCTCACCG TGGGCGGTGG CGGTGGTGGA GCCGGGGCGC CCGCCGCGGG CGGCGCCAAG
AACATCGTGG CCTCCTCACC GCAAGGCGGC GGCGGCGGCG GCGGCGGATC GAGCATCACC
ATGGATGCCG AGTCCATCAC CCTCAAGGTG GGCGCAAGCA CGCTGATCCT GCAGGCCGAC
GGCACCATCA CCGCCAACGG CGAGAGCATA AAGCTCATCG GCGCCAGCGA CGTCACCACC
AACTCCGGAG GCATCCATGA AAACTGA
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| Protein sequence | MRQDGARRCK MTRRVTIQTP LGEQLQFRQL RGSEELSQLF SFDIDLLSEG REIDPKTLLG
KTATVEIETE GGGKRYLDGL VTRFGMQGQD HRLYSYHLRL QPWLWVATRR QDFRIFQFKT
VPQIVQEVLG RYGYPMQLKL TRAYRAWDYC VQYGESDFDF VSRLLEHEGA YYYFQHASGQ
HTLVIADDIV AGHEPLPGAA VIPFYPPEKS ATADRENIHA WSLGEEIKPG RYYNDDYDFK
KPRSDLSNMR QQPPGHAHDA YEIYEWPGGY VQHGDGEQYA RVRLQEGLTG HSTVRGESRH
RSLAPGYTFT LENYPRGDQN RQYLITGVTY HLHENPRSSS FNSAKPGEAL KHNEEQGSFQ
KFSLTAQPTS LPYTPARKTP KPRTTGPQTA VVVGPAGEEI WTDEYGRIKV QFHWDRLGAM
DENSICWMRV ATSWAGSGFG AISIPRIGHE VVVDFLNGDP DYPLVVGCVY NAANMPPWAL
PGNATQSGIK TKSSKGGAFG DGMKNGAGDA NAIRFEDKKG AEQLWLHAQK DQLTEVENDE
DKWVGQDRRK TIDRDETTIV HRDRTETVDR DEKITVHNNR TERVDHDETI SIGDNRREDV
GIDETVSIGK NRTKTIGRNE KDKIGNNWSI KVGKMKTETI GIAYMQNVGV GRMENVGVAY
NLNVGAVMAT VVGSTQTTMV GSDRSVKVGS NQNTDVGTKY TLTVGGGGGG AGAPAAGGAK
NIVASSPQGG GGGGGGSSIT MDAESITLKV GASTLILQAD GTITANGESI KLIGASDVTT
NSGGIHEN
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