Gene Aave_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2647 
Symbol 
ID4665311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2909679 
End bp2910140 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content68% 
IMG OID639823850 
Producthypothetical protein 
Protein accessionYP_970993 
Protein GI120611315 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00167697 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCTCGT GGACCGGCGG TAGCCCGGAC TGCGCCGCGC CCTTCTGGAA GATCGACATG 
AATTCCCTGC ACATCGCCCG CTTCACCGTG GCGTACTGGT GCGTTTTCGC GATGGCGCTC
ATGCCGGTCG CCTGCGCCGT GCTGGCCAAG CGCGGCGGGT TCAGGGCCGC GGACAACCAC
GATCCGCGCG GCTGGGCAGC GCGGCAGACC GACTGGCGCG CCCGCGCGCT CGCAGCCCAG
TCCAATACCT TCGAGTGCCT GCCGTTCTTC ATCGGCGCGG TGATCGTCGC GCACCAGCTG
GGCGCCGCGC AGACCCTGCT CGACCTGCTG GCCCTGGCGT TCGTGATGCT GCGGATGTTC
TACGTGCTGA TGTACGTCTC CGACATGCCT GCCATCCGCA GCGCCGTCTG GCTGGGTGCC
TTCGCGGTCA ACACGGCCAT TTTCTTCCTG GGCTACCGCT GA
 
Protein sequence
MPSWTGGSPD CAAPFWKIDM NSLHIARFTV AYWCVFAMAL MPVACAVLAK RGGFRAADNH 
DPRGWAARQT DWRARALAAQ SNTFECLPFF IGAVIVAHQL GAAQTLLDLL ALAFVMLRMF
YVLMYVSDMP AIRSAVWLGA FAVNTAIFFL GYR