| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2625 |
|---|
| Symbol | |
|---|
| ID | 4666640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 2878062 |
|---|
| End bp | 2879582 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639823828 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_970971 |
|---|
| Protein GI | 120611293 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.620551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC GCCAGAAAAA CCAGCGCGCA AGGCGCGACA ACATGCACGA CGGAACATTG
CTCGCCGCGG TGGATCTCGG ATCCAACAGC TTTCGCCTCG AAATCGGACG CTTCGAGCAC
GGGCTGATAC GCAGGATCGA ATACCTCAAG GAAACCGTCC GCCAGGGCAA CGGCCTGGAC
GAAGACCGCA ACCTCACGCC CGACGCCATG CAGCGCGGCT GGGACTGCCT CGCGCGTTTC
GCCGAGCGCC TCAAGGGTTT TCCGGCCGAG AGGGTGCGCG CCGTCGCCAC CCAGACACTG
CGCGAAGCGC GCAACCGCGA CGCCTTCCTG CAGCGCGGCA GCGCCCTGCT CGGCCACCCG
ATCGACGTCG TCTCCGGCCC CGAAGAGGCC CGCCTGATCT ACCAGGGCGT GGCCCACCTG
CTGCCCCAGT CGGACGAGCG CCGGCTGGTG GTGGACATCG GCGGCCGCTC CACGGAGCTG
ATCCTGGGCC ATGGCTTCTC GGCCGACACG GTGGCCTCGT TCCGCGTGGG CAGCGTAGCC
TGGTCCAGCC GCTACTTCCC GGAGGGCGCC TTCACCCCGG AGTCTTTCCG CACCGCCGAG
ATCGCGGCCC AGGCCGTGCT GGACGAGGCG CTCAACACCT ACCGGCCCCA GGCCTGGGAC
GTGGCCTATG GATCCTCCGG CACCGCCGGC GCGATCGGCG ACATCCTGGC CGTGCTGGGC
GGCCCGCCCG GCCTCATCAC CCGGTCCGGG CTGGACTGGC TGCGGGAGCA ACTGCTTCGC
GCCCGCACGG TGGACAAGGT GCGGCTGGAG GGCCTGAAGG AAGACCGCCG GCCGGTGATC
GGCGGCGGCC TCAGCGTGCT GCGCGCCGTG TTCGACCTGC TGGACATCCG CGAGATGCAG
GTGGCCCAGG GCGCATTGCG CCAGGGCGTC CTGTACGACC TGCTCGACCG CGAACTGCAT
GCCGACGACC TGCGCTCCTC CACGGTGCTC GGACTGATGG AGCGGTTCCG CGTAGATGTC
CGGCATGCCG AGCGCGTAGC CCGCACGGCC GCCCTGCTCC ACCAGCAGGC CTGTCCCGGC
GTCGCCGAGC AAAGCCACAG GGAACTCGTC TGGGCCGCGC GACTGCACGA GATCGGCTGC
ATCGTCTCCC ATGGCGATCA CCACCACCAT GGCGCCTACC TCCTGGACCA CACCGACGCG
GCGGGTTTTT CCGTGTCGGA GCTGCGCCAC CTCGGCCGGC TCGTGCAGGG CCACCGGGGC
AAGGTGCGCA AGCTCGAGGC CGACATCGAC GATCCGCGGC TGGCCCACCA GCTCGCCTGC
CTGCGCATGG CGGTCGCCCT GTGCCATGCC CGCCGGGACC CGGACCTGGA AGGTGTGGCC
CTGGTGCGCG ACGGGCACCG CTTCGTCGCC TCGGCCCGCC CGGGCTGGGC CGCGGCGTAT
CCGCAATCGG CCCACCTGCT GCGCGAGGAA GGCACCGCAT GGCAGAGAAC CGCCTGGGAG
TTCGTGGCCG AATTGACCTG A
|
|---|
| Protein sequence | MLRRQKNQRA RRDNMHDGTL LAAVDLGSNS FRLEIGRFEH GLIRRIEYLK ETVRQGNGLD
EDRNLTPDAM QRGWDCLARF AERLKGFPAE RVRAVATQTL REARNRDAFL QRGSALLGHP
IDVVSGPEEA RLIYQGVAHL LPQSDERRLV VDIGGRSTEL ILGHGFSADT VASFRVGSVA
WSSRYFPEGA FTPESFRTAE IAAQAVLDEA LNTYRPQAWD VAYGSSGTAG AIGDILAVLG
GPPGLITRSG LDWLREQLLR ARTVDKVRLE GLKEDRRPVI GGGLSVLRAV FDLLDIREMQ
VAQGALRQGV LYDLLDRELH ADDLRSSTVL GLMERFRVDV RHAERVARTA ALLHQQACPG
VAEQSHRELV WAARLHEIGC IVSHGDHHHH GAYLLDHTDA AGFSVSELRH LGRLVQGHRG
KVRKLEADID DPRLAHQLAC LRMAVALCHA RRDPDLEGVA LVRDGHRFVA SARPGWAAAY
PQSAHLLREE GTAWQRTAWE FVAELT
|
|---|
| |