| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2587 |
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| Symbol | |
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| ID | 4669516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 2833335 |
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| End bp | 2834246 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639823790 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_970933 |
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| Protein GI | 120611255 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0233222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00609542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAACCTC AAGAACTCAA GACCATCATG GGCTCCGGCC TGCTGTCCTT TCCGCTGACG
GACTTCGACA GCGAAGGCCA CTTCAACGCC CGCGGCTATG CCGAACGCCT CGAATGGCTC
GCCCCGTACG GCGCCAGCGC CCTCTTCGCG GCCGGCGGCA CGGGCGAATT CTTCTCGCTC
ACCGCCGACG AGTACCCGGC CATCATCGAG ACCGCCGTGC AGACCTGCCG CGGCAAGGTG
CCGATCATCG CGGGCGCCGG CGGCCCGACG CGCTTCGCCA TCCAGTGCGC CCAGGCCGCC
GAGAAGGCCG GCGCCCACGG CATCCTGCTG CTGCCGCACT ACCTCACCGA GGCCGGCCAG
GAGGGCCTGG CAGCACACGT CGAGGCCGTC TGCAAGAGCG TGAAGTTCGG CGTCATCGTC
TATAACCGCG GCCAAAGCCG CTTCACGCCC GAGACGCTCG CGCGCCTGGC CGAGCGCAAC
GCCAACCTCG TGGGCTTCAA GGACGGCGTC GGCGACATCG AGCTGATGAA CTCCATCTAC
ATGAAGATGG GCGACCGCTT CGCCTACCTG GGCGGCCTGC CCACTGCCGA GGTGTATGCG
GCCGCGTACA AGGCCCTGGG CACACCGGTG TATTCCTCGG CGGTTTTCAA CTTCATCCCG
AAAACGGCGA TGGACTTCTA TCACGCGGTG GCGAACGACG ACCAGGCCAC GCAGCACCGG
CTGCTGCGCA GCTTCTTCAT GCCCTACCTG GCATTGCGCA ACCGCATGCC GGGCTATGCG
GTGAGCATCG TGAAGGCCGG AGCGAAGATC GTCGGGCACG ACGCGGGACC GGTCCGCGCG
CCGCTCACCG ACCTCAAGGC CGACGAGATG GCCGCCCTCA AGGCACTCAT CGACCAGCTC
GGTCCGCAGT AA
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| Protein sequence | MQPQELKTIM GSGLLSFPLT DFDSEGHFNA RGYAERLEWL APYGASALFA AGGTGEFFSL
TADEYPAIIE TAVQTCRGKV PIIAGAGGPT RFAIQCAQAA EKAGAHGILL LPHYLTEAGQ
EGLAAHVEAV CKSVKFGVIV YNRGQSRFTP ETLARLAERN ANLVGFKDGV GDIELMNSIY
MKMGDRFAYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMDFYHAV ANDDQATQHR
LLRSFFMPYL ALRNRMPGYA VSIVKAGAKI VGHDAGPVRA PLTDLKADEM AALKALIDQL
GPQ
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