| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_2572 |
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| Symbol | |
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| ID | 4668111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 2821485 |
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| End bp | 2822744 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639823775 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_970918 |
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| Protein GI | 120611240 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0647268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00287604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAGCT ACCAGCACAT CAAGGTCCCT GCCGAAGGCC AGAAGATCAC CGTCAATGCC
GACATGTCCC TGAACGTGCC GGACCAGCCC ATCATTCCCT ATATCGAGGG TGACGGTACC
GGCTTCGACA TCACCCCTGT GATGCTGAAA GTGGTGGACG CGGCCGTGGC CAAGGCCTAC
GGCGGCAAGC GCAAGATCCA CTGGATGGAA GTCTTCGCCG GCGAGAAGTC CACGAAGGTG
TACGGTCCCG ACGTCTGGCT GCCGGAAGAA ACCCTGCATG CCGTGCGCGA CTACGTCGTT
TCCATCAAGG GCCCGCTGAC GACGCCCGTG GGCGGCGGCA TCCGCTCGCT GAACGTGGCG
CTGCGCCAGG AACTCGACCT CTACGTCTGC CTGCGCCCCA TCCAGTACTT CAAGGGCGTT
CCCTCGCCCG TGAAGGAACC CGAGAAGACC AACATGGTGA TCTTCCGCGA GAACTCGGAA
GACATCTATG CCGGCATCGA GTTCGAAGCC GAGTCCGACA AGGCCAAGAA GCTCATCAAG
ATCCTGCAGG AGGAGTTCGG CGTCAAGAAG ATCCGCTTCC CCGAGACCTC CGGCATCGGC
GTGAAGCCCG TGTCCAAGGA AGGCACGCAG CGCCTGGTGC GCAAGGCCAT CCAGTACGCC
ATCGACAACG ACAAGCCCAG CGTGACCATC GTCCACAAGG GCAACATCAT GAAGTTCACG
GAAGGCGGCT TCCGTGACTG GGCCTACGAC CTGGCTGCCA GGGAATTCGG CGCCGAACTC
ATCGACGGCG GCCCGTGGAT GAAGTTCAAG AACCCGCGCA CCGGCAAGGA AATCACGGTC
AAGGACAGCA TCGCCGACGC GTTCCTGCAG CAGATCCTGC TGCGCCCCGC CGAGTACAGC
GTGATCGCCA CGCTGAACCT GAACGGCGAC TACGTCTCCG ACGCGCTGGC AGCCCAGGTG
GGCGGCATCG GCATCGCCCC GGGCGCCAAC CTGTCCGACT CCGTCGCGAT GTTCGAAGCC
ACGCACGGCA CGGCACCGAA GTACGCCGGC AAGGACTACG TGAACCCCGG TTCCGAAATC
CTTTCCGCCG AAATGATGCT GCGCCACATG GGCTGGACCG AAGCGGCCGA CATCATCATC
AGCTCGATGG AAAAATCCAT CCTGAGCAAG AAGGTGACCT ACGACTTCGC CCGCCTGATG
GAAGGTGCGA CGCAGGTGAG CTGCTCGGGC TTCGGCCAGG TGATGATCGA CAACATGTGA
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| Protein sequence | MTSYQHIKVP AEGQKITVNA DMSLNVPDQP IIPYIEGDGT GFDITPVMLK VVDAAVAKAY
GGKRKIHWME VFAGEKSTKV YGPDVWLPEE TLHAVRDYVV SIKGPLTTPV GGGIRSLNVA
LRQELDLYVC LRPIQYFKGV PSPVKEPEKT NMVIFRENSE DIYAGIEFEA ESDKAKKLIK
ILQEEFGVKK IRFPETSGIG VKPVSKEGTQ RLVRKAIQYA IDNDKPSVTI VHKGNIMKFT
EGGFRDWAYD LAAREFGAEL IDGGPWMKFK NPRTGKEITV KDSIADAFLQ QILLRPAEYS
VIATLNLNGD YVSDALAAQV GGIGIAPGAN LSDSVAMFEA THGTAPKYAG KDYVNPGSEI
LSAEMMLRHM GWTEAADIII SSMEKSILSK KVTYDFARLM EGATQVSCSG FGQVMIDNM
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