Gene Aave_2567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_2567 
Symbol 
ID4668398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp2817920 
End bp2819230 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content73% 
IMG OID639823771 
Productexodeoxyribonuclease VII large subunit 
Protein accessionYP_970914 
Protein GI120611236 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID[TIGR00237] exodeoxyribonuclease VII, large subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00271156 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTGAAC GGCCGGACCC AGCAACGGCG CCGCGAATCT GGGACGTCGG GGCGCTGTGC 
CGCGCCGTTG CTGATGCGCT GGAGGCGCGG TTCAATCCTG TGGCGGTGCG CGGGGAGATC
ACGGGCTTCT CGCGGGCTTC CAGCGGGCAT TGCTACTTTT CCATCAAGGA CGGACAGGGA
CAGATCCGCT GCGCCATGTT CCGCCGCGCA GCCATGTTGC TCAACGGCAC CCCGCGGGAC
GGGGAAATGG TCGAGCTGCG GGGACGGCTG GCGGTTTACG AAGCCCGGGG CGACCTGCAG
CTCATCGTCG AGAGCCTGCA GCGGGCAGGG CAGGGGGCGC TGTTCGAGCA ATTCCTGCGG
CTCAAGGCCC GGCTGGAATC GGAAGGCCTG TTCGACTCCG CCCGCAAGCG CGGCCTGCCG
GTCATGCCCC GCTCGATCGG GCTGGTCACC TCGCCGGGCG CCGCCGCGCT GCACGATGTG
GTGACCGCCC TGCGGCGGCG CGTTCCGCAC CTGCCGGTGG TGCTGGCCCC GGCCCTGGTG
CAGGGGGCGG CCGCGCCGGC ATCGATCTGC ACCGCCCTGC GCGCGCTCTA CCGCATGGCC
GAGCCGGGCG GCGGCGCAGG CCATCCGCCG GTGGAGGTGA TCCTGCTGGT GCGCGGCGGC
GGCTCCATCG AGGACCTGTG GGCCTTCAAC GACGAGCAGG TCGCCCGCAC GCTGGTGCAG
AGCCCCGTGC CGGTGGTGTC CGGGGTGGGC CATGAAACGG ATTTCACCAT CGCCGATTTC
TGCGCCGACC TGCGGGCCCC GACCCCCACG GCCGCGGCCG AACTGGTCGC GCAACCCCAG
GCCACCTGGC TCGCAGGCAT GGACGCGCTG GCCGGCCGCC TGTCGGACAG CCTGCAGCGC
CAGCTCGACG GGCGCCACCA GCGGCTGGAC ATGGCCGCCC AGCGGCTGGG GCGGCCGTCC
GGCCTGGTCA CCCGGCAGGA ACTGCGCCTC GCGCGCCTCG CGCAGCAGCT GCGCCACGGC
GCGGCCTGGA CGACCCAGCG GTACGCCCAG CGGCAGGATG CCCTGGCAGA CCGTTTGCCA
AGGGCTGTGG CGCAGGGCGT GGCCCGGCAG GCGCAGCGGC TGGACCATGC GGCATTGCGG
CTGGAACTGC TCGACCCGCG CCTGGTGCTC CAGCGCGGCT ATGCGCTGCT CACGGACAGC
GGGGGCCTGC CCGTGACCCG CACCGCCCAG GTACGCACCG GAGACGCCGT GCGCGCCGCC
GTATCGGACG GCGAGATCGA TCTGACGGTG TCTGCTCCGC GCCCGCTGTG A
 
Protein sequence
MFERPDPATA PRIWDVGALC RAVADALEAR FNPVAVRGEI TGFSRASSGH CYFSIKDGQG 
QIRCAMFRRA AMLLNGTPRD GEMVELRGRL AVYEARGDLQ LIVESLQRAG QGALFEQFLR
LKARLESEGL FDSARKRGLP VMPRSIGLVT SPGAAALHDV VTALRRRVPH LPVVLAPALV
QGAAAPASIC TALRALYRMA EPGGGAGHPP VEVILLVRGG GSIEDLWAFN DEQVARTLVQ
SPVPVVSGVG HETDFTIADF CADLRAPTPT AAAELVAQPQ ATWLAGMDAL AGRLSDSLQR
QLDGRHQRLD MAAQRLGRPS GLVTRQELRL ARLAQQLRHG AAWTTQRYAQ RQDALADRLP
RAVAQGVARQ AQRLDHAALR LELLDPRLVL QRGYALLTDS GGLPVTRTAQ VRTGDAVRAA
VSDGEIDLTV SAPRPL